Ipomoea triloba (trilobed morning glory): 116016522
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Entry
116016522 CDS
T07384
Name
(RefSeq) U-box domain-containing protein 13-like
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
116016522
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
itr04121
]
116016522
Enzymes [BR:
itr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116016522
Ubiquitin system [BR:
itr04121
]
Ubiquitin ligases (E3)
U-box type E3
116016522
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arm
PUB10_N
ARM_PUB
U-box
ARM_ARMC5
MLKL_N
HEAT_2
Neurochondrin
HEAT_EZ
PUB2_N
zf-RING_UBOX
zf-Nse
Arm_2
zf-C3HC4_4
MCAfunc
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-NOSIP
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
116016522
NCBI-ProteinID:
XP_031112689
LinkDB
All DBs
Position
4:32684675..32690720
Genome browser
AA seq
665 aa
AA seq
DB search
MEDEKEAIARQLIELANEISAISDFRSTVKKQYCNLARRLKLLTPLFEEIRDSKEPLPEA
SLKALLSLKAALESAKDLLKFGGEGSKIFLVLERDQITNQFQEVTNQLEQALGEISYENL
DISDEVKEQVELVLLQFRRAKARADSPDDELYEDLLSLYNGNSDTAVDPAVFRRLVEKLQ
LAGINDLTQESLALHEMVTATGGDPEETIEKMSMLLRRIKDFVQTENPDIISSAKEVSSS
CGQASTEGSHKTPAIPDDFRCPISLELMRDPVIVATGQTYERSCIEKWLEAGHTTCPKTQ
QPLTSNTLTPNYVLRSLITQWCEANGVEPPKRPGSSQSCQTTSACSTAEGSKIETLISKL
RSGNPEDQRTAAGEIRLLAKRNADNRIAIAEAGAIPLLVNLLSTPDSRTQEHAVTALLNL
SICEDNKGAIISSGAVPGIVHVLKKGGMEARENAAATLFSLSVVDENKIIIGGSGAISPL
VTLLNEGSQRGKKDAATALFNLCIYQGNKGKAVRAGVVPTLMQLLTEPQGNMVDEALAIL
AILASHPEGKVAIGGAKAVPVLVGVIANGSPRNKENAAAVLVHLCSGEQHVVEAQELGIM
GPLLDLAQNGTERGKRKAAQLLEKINRFAEQQNPAQTVAPPAETPAQTENQLQSRPPAST
ATVDG
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgagaaagaagctatagcgaggcagcttattgagctggcaaacgaaatatcg
gcaatttctgacttcaggtccacggtgaagaagcagtactgcaaccttgcgaggcggctg
aagctgttgactccattatttgaagagattcgcgatagcaaagagcccctccctgaagcc
tccttgaaagccctgctctctttgaaggctgctctcgaatcagctaaggatttgctcaaa
tttggcggggaaggcagcaagattttcctggtgttagaaagggatcaaatcacaaatcaa
tttcaagaagtgaccaatcagctggaacaagctttgggtgaaatttcatatgaaaatctt
gacatatccgacgaagttaaagaacaggttgagcttgttcttttgcagttcagaagggcc
aaagcgagagctgattcacctgatgacgaactttatgaagatttgttatccctttacaat
ggtaatagtgatactgcagtggatccggctgtctttaggagattggttgaaaagttgcaa
ctagctggaataaatgacctcacacaagaatctctagctttgcacgagatggttactgct
actggtggggacccggaggagaccatagagaagatgtcgatgctattaaggagaattaaa
gattttgtgcagactgaaaatcctgacattatttcctctgcaaaagaagtgtcttcgagt
tgtggacaggcgtctacagaggggagtcacaagacccccgcaataccagatgatttccgt
tgtcctatatcactggagctgatgagagacccagtcattgttgcaacaggacagacgtat
gaacgttcttgcatcgagaaatggctggaagcaggacataccacttgcccaaagacgcaa
cagccactcactagcaataccctcactcccaactatgttttacgaagccttataactcaa
tggtgcgaggcaaatggggtagagccgcccaaacgacctggcagttctcagtcctgtcag
acaacgtccgcttgctcaactgctgaggggtccaagattgaaactctaatctccaagcta
agatctggcaaccccgaagatcaacgaactgcagcaggcgaaatccgccttcttgccaag
cgcaatgcagacaatcgtatagcaatagctgaagctggcgccattcctctgcttgtaaac
cttctatccacacccgattctcgcactcaagaacatgcggtcacggctctacttaacctc
tccatatgtgaggacaataaaggagccatcatatcttccggggcagtgcccgggattgtc
catgtgctcaagaagggaggcatggaagctcgggaaaacgcagctgccactctgtttagc
ctctcggttgtggacgaaaacaagatcataatcgggggttctggagcaatctcccccctc
gtaaccctattaaacgagggtagccaacgaggaaagaaagacgctgcaactgcactcttc
aacctctgcatataccaaggcaacaagggcaaggcagtaagggcgggtgtcgtgccaacg
ctaatgcagctattaaccgagccacaaggcaacatggtggatgaggccttagcaatactg
gcaatcttggctagtcatcctgaagggaaagtagccattggaggtgcaaaagctgtgcca
gttctagtgggcgtcatagccaacgggtccccaagaaacaaagaaaatgcagctgcagtt
ctggttcacctctgctcaggagaacaacacgtagtagaagctcaagaactgggaataatg
ggacctttgcttgatttagctcagaatggcacagaaagagggaaacgaaaagctgcacag
ttattagagaagataaacagatttgctgagcaacaaaacccggcccagacggtggcgccg
cctgcagagactcctgctcaaactgagaaccagttgcagtcacggccgccggcgtcaact
gccaccgtggacggttga
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