Ipomoea triloba (trilobed morning glory): 116016583
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Entry
116016583 CDS
T07384
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
116016583
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
itr04121
]
116016583
Ubiquitin system [BR:
itr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
116016583
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
116016583
NCBI-ProteinID:
XP_031112775
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Position
4:complement(28988591..28991964)
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AA seq
581 aa
AA seq
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MAYSFPEEVLEHVFSFLSSDKDRNAVSLVCKSWFEIERWCRRRIFVGNCYAVSPSIMIRR
FPEVRSLELKGKPHFADFNLVPENWGGFVYPWIIAMSRSYPWLEEIRLKRMVVNDESLEL
IARSFKNFKVLVFAFCEGFTTDGLAAITAKCRNMKELTLRECDVEDLSGYWLIDLSENCT
SLESLDITCLSCEVSFSALERLVSRCPNLRTLRLNRALPLEKLHILLRRAPQLVELGTGA
LTAEVRSDTFSNLADAFSGCKQLKGLSGFWDVTPAYLPAIYPVCYGITSLNLSYASIQSP
DLFKFVSQCHNLQRLWVQDYIEDIGLEAIAASCKDLQELRVFPSDPYGADPNVILTEQGL
VAVSEGCPKLQSVLYFCRQMSNAALDAIARNRPNMIRFRLCIIEPRTPDYLTLEPLDTGF
GAIVQHCKDLRRLSLSGLLTNRVFEYIGSHAKKLEMLSIAFAGDNDLGLHYVLSGCESLR
KLEIRDCPFGDKALLANAAKLEKMRSLWMSSCSVSFRACKLLGQKMPRLNVEVIDERGPP
NSRPEDDPVEKLYIYRTVRGPRLDTPEFVWTMHEDAALRFS
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggcgtactcgtttccggaggaagtgttggagcacgtgttctcgtttctgagctccgac
aaggaccggaacgcggtgtcgctggtgtgtaagtcgtggttcgagatcgagaggtggtgc
cggaggaggatattcgtcggaaactgctacgccgtgagccctagcatcatgatccgccgt
ttccccgaggtccgatcgctggagctcaaggggaagcctcatttcgcggatttcaatctg
gttcccgagaactggggcggtttcgtctacccctggattatcgccatgtcccgctcgtac
ccttggctcgaggagattaggctcaagagaatggtcgtcaacgacgagagcttggagctc
atcgctaggtcctttaagaacttcaaggtcctcgtctttgcgttttgcgaggggttcact
actgatggactcgccgccataaccgccaagtgcaggaatatgaaggaactaaccctgcga
gagtgtgatgtggaggacctaagtgggtattggcttattgatttatctgagaactgcacg
tcgctggagtctcttgacataacttgcttgagctgtgaggtgagcttctcagctctggag
cgattggtttccaggtgtcctaatctaaggacgcttcgcctcaaccgtgccctcccacta
gagaagcttcacatccttcttcgccgtgctccccagttggttgagttaggcacaggtgcc
ctcacggctgaggtccgttccgatacattttccaacctggctgatgctttttcaggctgt
aagcaacttaagggtttgtctgggttttgggatgtgactccagcttaccttccagcaata
tatccagtctgctatggaattacgtctttgaatttaagctatgctagtattcagagcccg
gatcttttcaagtttgtaagccagtgtcacaacttgcagcggctatgggtacaggattac
attgaagatattggtctagaggctattgctgcgtcttgtaaggatcttcaagaactcaga
gtttttccttctgacccttatggagcggatccaaatgtaattttgacagagcaaggtctt
gtagccgtctctgagggctgccccaagctgcagtcagtattatacttttgccgccaaatg
tcaaatgcagcattagatgctattgctcggaaccgtcctaatatgatccggttccgtctc
tgcattatagagcctcgaactcctgattatcttaccctagaacctctagatactggtttt
ggggccattgtacaacactgcaaagatttgcggcggctttccctctctggtctgctcact
aatagggtgtttgagtacatcgggagtcatgctaagaaattagagatgctctctatagct
tttgccggggataatgatctgggcctccattacgtgctatcagggtgtgaaagcctgaga
aagttggagatcagagactgcccttttggggataaggctctcttggccaatgctgcaaag
ctggagaaaatgcgatccctttggatgtcttcttgctcagtaagttttagagcatgtaag
ctcttaggccaaaagatgcctaggcttaatgttgaagttatagatgagaggggccctcca
aattcaaggccagaagatgaccctgtcgagaaactctacatttaccgaacagttagaggt
ccaaggctcgatacgcctgaatttgtttggacaatgcatgaagacgcagcattgaggttt
tcttaa
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