Ipomoea triloba (trilobed morning glory): 116016600
Help
Entry
116016600 CDS
T07384
Name
(RefSeq) spastin isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
itr04131
]
116016600
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
itr04812
]
116016600
Enzymes [BR:
itr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
116016600
Membrane trafficking [BR:
itr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
116016600
Cytoskeleton proteins [BR:
itr04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
116016600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_5
RuvB_N
NPHP3_N
AAA_16
AAA_22
TIP49
AAA_14
Vps4_C
Mg_chelatase
MIT
AAA_2
AAA_25
DUF815
IstB_IS21
AAA_24
nSTAND3
RNA_helicase
ABC_tran
AAA_7
Guanylate_kin
AAA_17
bpMoxR
MCM
AAA_28
AAA_33
PhoH
AAA_30
Parvo_NS1
AAA_18
DUF4368
Motif
Other DBs
NCBI-GeneID:
116016600
NCBI-ProteinID:
XP_031112799
LinkDB
All DBs
Position
4:complement(868800..876790)
Genome browser
AA seq
505 aa
AA seq
DB search
MSFLKELAETLSSIFYDHQSASSSSSSSSSSSSSSSSSSYQSQQNPAGRPMDGVSTGNER
TAYKLKSYFDLAKEEIAKAVRAEEWGLAEDAVSHYQNAQRVLSEGISTPVPSYISSSELE
KAKSYRQKMSQWQGQVAERIQTLSQRAGISGSTSVIKSGAPRVQSASASPTSSYLRRSAV
EKPSVSSNASAVRIQSNKAGSSKPVQDSGGGYDAKLVEMINSVIVDRSPSVKWEDIAGLE
KAKQALLEMVILPTKRRDLFTGLRKPSRGLLLFGPPGTGKTMLAKAVASESQATFFNVSA
SSLTSKWVGEGEKLVRTLFMVAISKKPSVIFMDEIDSIMSTRTANENEASRRLKSEFLIQ
FDGVTSSSDDLVIVIGATNKPQELDDAVLRRLVKRIYIPLPDAGVRRQLLKHRLKGQQFS
LPDGDLAKLVKETEGYSGSDLQALCEEAAMMPIRELGSNILTVKANQVRGLRYADFQKAM
TVIRPSLQKSKWEELEQWNREFGAN
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgagctttctcaaagaattggcggaaaccctaagctcaattttctacgatcatcaatca
gcatcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcgtac
cagtctcagcaaaatcctgcaggtcgaccgatggacggcgtgagcaccgggaacgagcgc
acggcatacaagctcaaaagctactttgatttggctaaagaagagatcgccaaagcggtc
cgggccgaggagtggggtttagctgaagatgccgtttcacattaccaaaatgcgcagaga
gttctgtcggaaggcatttctactcccgttccttcgtatatcagctctagtgaattagag
aaagcaaaatcttatcggcaaaagatgtcacagtggcagggtcaggttgcagagagaatt
caaactttaagccaaagagcaggaatttccggtagtacatctgtaatcaagagtggtgct
cctcgggtgcaaagtgcatctgcttcaccaacaagctcttatcttagaagatctgcagtt
gaaaaaccttctgtctccagtaatgccagcgcagttaggattcagtctaacaaagcagga
agctcaaaacctgtgcaagattctggaggcggatatgatgcaaaattggttgaaatgata
aattctgtgatagtggatagaagtccttctgtaaaatgggaagacattgctggcctagaa
aaggcaaaacaagctctgttggaaatggtaatattgccgaccaaaagacgggatctcttt
actggccttagaaagccttcaagaggtctgcttctttttggtccacccggtactggtaag
accatgcttgcgaaagcagttgcttcagagtcacaggcaacctttttcaatgtttctgct
tcctccctaacttcaaagtgggtgggagagggtgaaaagcttgtccggacccttttcatg
gttgccatttccaagaaaccatctgttattttcatggatgagattgatagtattatgtca
actaggacggccaatgagaatgaagccagcaggaggttgaaatcagaatttctaatccag
ttcgatggggttacatctagttcagatgatttggtaattgtcatcggtgcaacaaataag
ccacaggaattggatgatgcagttctcaggagattggtgaagagaatatatattcctttg
ccagatgctggtgttagaagacagctcctaaagcacagactaaagggacaacaattctct
ttgcctgatggagatctagcaaaacttgtaaaagagacagaagggtattctggaagcgat
cttcaagcgttgtgtgaggaagccgcaatgatgccaatcagagagcttggttcgaacatt
ctcacagtgaaggcaaatcaggtacgaggtctgagatatgctgactttcagaaggccatg
actgtgatcaggcctagtctgcaaaaaagcaagtgggaagagctcgagcagtggaataga
gagtttggcgcaaactaa
DBGET
integrated database retrieval system
