Ipomoea triloba (trilobed morning glory): 116016723
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Entry
116016723 CDS
T07384
Name
(RefSeq) E3 ubiquitin-protein ligase RHF2A-like
KO
K19043
E3 ubiquitin-protein ligase RHF [EC:
2.3.2.27
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
itr04121
]
116016723
Enzymes [BR:
itr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116016723
Ubiquitin system [BR:
itr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116016723
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-RING_11
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
zf-RING_Vps41
zf_RING_Vps8_fungal
Prok-RING_1
zf-Nse
DUF4302
zf-C3HC4_4
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
116016723
NCBI-ProteinID:
XP_031112960
LinkDB
All DBs
Position
4:34762794..34766407
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AA seq
386 aa
AA seq
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MEGGKVSESHLTSAAAFVEGGVQDACDDACSICLEAFSDNDPSSVTVCKHEFHLQCILEW
GQRSSQCPMCWQSLSLKDPNSQELFDAVEHERNMRMNPPRNTTIFRHPTLGDFELQHLPV
SSTDSELEERIIQHLAAAAAMGRARHLARRGGQRGRASSQGHPHFLVFSTNPNPSPTVPA
FSTQRTGGEPASPVPVSGSTPLVVVGEGSGQFVALPSSAQTDSISGAGLSAGVGQLGTSS
NNNRGSPSQSSPHNQNRAGPSDFQSFSESIKSRLSAMSTRYKESITKSTRGWKERFFSRN
NSMQDHDGSEAQNEVSSDLATVSRLMEHPETRETSRTPVSPLSNRLEEDLPHLLADRSEP
QISEIDGNHSLSEGNSQTPCATSSSH
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggagggaggaaaggtttctgagagccatttgacttcagccgcagcgtttgtggaaggt
ggagttcaggatgcttgtgatgatgcttgcagcatatgccttgaagcgttttctgacaat
gatccatcatctgttacggtttgcaagcatgaatttcacctgcagtgcatccttgaatgg
ggccagagaagctcacagtgccctatgtgttggcagtctcttagtttgaaagaccccaac
agccaggaactgtttgatgcagtagaacatgagaggaatatgaggatgaaccccccaaga
aacaccacaatttttcgtcacccaaccttgggggattttgaattgcagcatttaccggtt
agctcaactgattctgagctggaagagcgcattattcaacacttagctgctgctgctgct
atgggcagggcacggcaccttgctaggagaggaggtcagaggggtagggcatcgtctcaa
ggtcatcctcattttctcgtgttctcaacgaatccaaacccgtctcctacggtccctgcc
ttctctactcagaggactggaggtgaacccgcatctccagtcccggttagtggctctact
cctctggttgtggttggtgaaggctcggggcaattcgttgcactaccgtcttctgcccaa
actgattctatctctggagcgggattaagcgctggtgttggtcaacttggaacttcatca
aataataaccggggttctccttctcagtcttctcctcacaatcaaaatagagctggaccg
tctgattttcagtctttctcagaatctataaaatcacgacttagtgcaatgtcaacgaga
tacaaagagtcgatcaccaagagcacaagaggttggaaggagagatttttctctcgaaat
aattctatgcaagatcacgatggttcagaagctcagaatgaggtcagttcagatcttgcc
actgtatcacgcctcatggagcatcccgaaactagggagactagtaggactcccgtttct
cctttatcgaataggttggaggaagatttgccgcatttgctagcagatcgctctgagccg
caaatctcggagattgatggtaaccattcgttgagcgagggtaacagtcaaactccttgc
gctacaagctcttcccactga
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