Ipomoea triloba (trilobed morning glory): 116016733
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Entry
116016733 CDS
T07384
Name
(RefSeq) serine/arginine-rich splicing factor SR34A-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116016733
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
itr03041
]
116016733
Spliceosome [BR:
itr03041
]
Common components
Common spliceosomal components
SR proteins
116016733
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
Sharpin_PH
Motif
Other DBs
NCBI-GeneID:
116016733
NCBI-ProteinID:
XP_031112973
LinkDB
All DBs
Position
4:complement(15591033..15594999)
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AA seq
284 aa
AA seq
DB search
MRMELVEHCSTQGLLSWFAQMSGRFSRTIYVGNLPLDIREWEIEDLFYKYGRIQDIELKI
PPRPPGYCFVEFENSRDAEDAIRGRDGYNFDGCRLRVELAHGGRGPSSSVDRRGGYGGRS
SSRYGISKHSEYRVIVTGLPSSASWQDLKDHMRKAGDVCFAEVSTDREGTFGLVDYTNYD
DMKYAIRKLDDSVFKNPWTSTYIRVREYKSSPSRSHSRSRSRSRSPRRSRSKSAGRSVSR
SPPPRSRSASPVKSSRPLSKSRSRSRSKSRSKSASPRRARSNSG
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgagaatggagcttgtggagcactgctcaactcaaggattgctctcttggtttgctcaa
atgagtggccgtttctctcggacaatctatgtgggaaaccttcccctagacatcagagaa
tgggaaattgaagatttgttctataagtacggacgtattcaggatattgaattgaagatt
ccacctcgtcccccgggctattgttttgttgagtttgaaaattctagagatgcagaagat
gccattaggggtagagatggctacaactttgatggttgtcgactgagggttgagcttgct
catggtggtagagggccatcatcttcagttgatcggcgtggtggctatgggggcaggagt
tcatcacgttatgggatttctaagcattctgaatatcgagttattgttactggccttcct
tcttcggcttcttggcaagatttgaaagatcacatgcgcaaagctggtgatgtttgcttt
gctgaggtttccactgatagggaaggaacatttggcttggttgattatacaaattatgat
gatatgaaatatgctattaggaaacttgatgatagcgtgttcaaaaatccttggactagc
acttatatccgggtaagagagtacaagagcagtccatccagaagccacagcagaagcagg
agcagaagcagaagtcctaggaggagcaggagcaaatcagcaggtaggtctgtttccaga
tcaccaccgccacggtctagatctgcatcacctgtcaagtcatctagacctctgtcaaag
tcaaggtccagatcgaggtcaaaatcaagatcaaagtcagcatccccgcgccgggcacga
tcaaacagcggttaa
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