KEGG   Ipomoea triloba (trilobed morning glory): 116016781
Entry
116016781         CDS       T07384                                 
Name
(RefSeq) DNA repair protein RAD5A isoform X1
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
itr  Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:itr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:itr03400]
    116016781
DNA repair and recombination proteins [BR:itr03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    116016781
SSDB
Motif
Pfam: SNF2-rel_dom UBA_RAD5A Helicase_C HIRAN zf-C3HC4_3 zf-C3HC4 zf-RING_UBOX DEAD zf-RING_2 zf-C3HC4_2 Prok-RING_4 ResIII zf-C3HC4_4 zf-RING_5 RING_XB3-XBAT31 UBA_Rad5 zf-ANAPC11 MEIOC
Other DBs
NCBI-GeneID: 116016781
NCBI-ProteinID: XP_031113039
LinkDB
Position
4:33979642..33990382
AA seq 1040 aa
MGNKVPEELVSTVRSIVGDEYTEMDIIRALHMANNDATAAINIIFDTPGFKKLEFRKTSK
VPNLNSSSGTQSLGSTTRRSSSEDKKCERSTISDNGSQQKTENRESNNGCRSDADGCEME
SEWWFVGTSEVSGLSTCKGRSLKPGDEVYFTFPAEKKLNSPSLGKFGRGRHVVACSEIVR
FSSKALGEIGRIPNEWARCLLPLVREKKARVEGYCKSAPNILGIMDTIDLSVSVYINSSM
FRKSHKTLLKVATNNSTDESIVYPLPTLFRLLRLTPFQKAEFTPGDLYMRKRRLTEENSS
GIHTPSLHANKFKKLVTNEGEAEGDESISDTDLENIVGFADNSKLEEMEPPSTLQCELRS
YQKQALHWMTQLEQVHSVNDAKTTLHPCWEAYRLADKRDLVIYLNAFSGDATTEFPSTLQ
MARGGILADSMGLGKTIMTIALLLSCTERGGSPGSQSTSLPSHENGDTSDISDQSPTPSK
KAARFPGLEKFLKQKPTLKSGGNLIVCPMTLLGQWKAEIEMHACPGTLSLYLHYGQSRSK
DPKFIAQSDVVLTTYGVLASEFSSENAEENGGLFSVRWFRVVLDEAHTIKSSKSQISIAA
SALIAERRWCLTGTPIQNNIEDVYSLLRFLRIEPWGSWAWWNELVQKPFEEGDERGLRLV
QSILRPIMLRRTKSSTDREGRPILVLPPADIQVIYCELTEAEKDFYEALFKRSKVKFDQF
VEQGRVLHNYASILELLLRLRQCCDHPFLVLSRGDTQEFSDLNKLAKRFLKGGQKTGENH
VEDVPTRAYIQEVVEELRKGEQGECPICLEACEDAVLTPCAHRLCRECLLASWRSPASGF
CPVCRKTVSKQELITAPTDSRFQIDVEKNWVESSKVTALLHELEQLRAVNSKSIVFSQWT
AFLDLLQIALARNDIPFLRLDGTLNQQQREKVIKRFSEEDSVLVLLMSLKAGGVGINLTA
ASNAFVLDPWWNPAVEEQAVMRVHRIGQTKRVAIKRFIVKGTVEERMEAVQARKQRMISG
ALTDQEVRTARIEELKMLFT
NT seq 3123 nt   +upstreamnt  +downstreamnt
atgggtaacaaagtacctgaagaacttgtttctacggtccggtccatcgtcggcgatgag
tacaccgagatggatataattcgagctcttcatatggcaaataacgatgcaacggccgca
attaacatcatttttgacaccccgggtttcaaaaagttagaatttaggaaaacctctaag
gtacccaatcttaattcgagctcagggacacaaagtctaggttcaactacaaggagaagt
agtagtgaggataagaaatgcgagcgtagtacgatttcagataatggttcacagcagaag
actgagaaccgggagagtaataatgggtgcagaagcgatgctgatgggtgtgagatggag
agtgagtggtggtttgtgggtactagtgaggtttccggcctgtcaacctgcaaagggaga
agtttgaagcccggagatgaagtatatttcacttttcctgctgagaagaaattgaattca
ccatccttggggaaatttggccgaggtcgacacgtggttgcttgctctgaaattgtgcgg
ttctcttcaaaggcacttggagagattggaagaattccaaacgaatgggctcgatgtctc
ttgccacttgtgagggaaaagaaggctagggttgagggatattgtaaatctgctcctaac
atattggggattatggacacaatagatttgtccgtcagtgtgtatatcaacagttccatg
ttccgtaaaagccataagaccctcctcaaggtggctaccaacaattccacagatgaatca
attgtttatccccttccaacattgtttcgattgctacggcttactcctttccagaaggca
gagtttactccaggcgatctgtacatgaggaagcgtcgtttgactgaagagaacagttct
ggcattcataccccatcattgcatgctaataaattcaaaaaattggtcacaaatgaaggt
gaagctgaaggtgatgagtcaatctctgatactgatctggaaaatatagtaggttttgct
gacaactccaagttagaggaaatggaacctcctagtacacttcagtgtgaacttcgttct
tatcagaagcaggctcttcactggatgactcaacttgagcaggttcacagtgtgaatgat
gcaaaaacaactttgcatccgtgttgggaagcatatcgccttgcagacaagagagatcta
gtgatctacttgaatgcattttctggggatgcaacaacggaatttccaagcacccttcaa
atggccaggggtggaattttggcagattccatggggcttggaaagactattatgactata
gctctccttctaagttgtactgaaagaggtggatcaccaggaagccagtcaacaagcctg
ccttcccatgaaaatggtgatacaagtgatatctcagatcaatctccaactccttcaaag
aaagcagcaagatttcctggtcttgagaagtttttgaaacaaaaaccaacgctaaaatct
ggtggcaatctgattgtatgccctatgacacttttaggccagtggaaggcagagattgaa
atgcatgcatgcccaggcactttaagtctttatcttcattatggacaaagtagatcaaag
gatccaaagtttattgctcaaagcgatgttgtactaacaacatatggagttttggcatca
gaattttctagtgagaatgctgaggagaatggggggcttttctcagttagatggtttaga
gttgtgcttgatgaggctcataccataaaatcttctaaaagccaaatttctatagctgca
tctgctcttattgctgagcgtcggtggtgtcttaccggtacacccatccagaacaacatt
gaggatgtttacagcctcctaagatttttgaggattgaaccatggggaagctgggcatgg
tggaatgaacttgttcagaaaccctttgaggagggagatgagagaggattgaggttggtt
caatcaattcttagacctataatgttaagaagaacaaagtctagcactgatcgagaaggc
aggccaattttagttcttccaccggcagacattcaagtaatatactgtgaactcactgaa
gcagaaaaggacttctatgaggccttgttcaaacgatcaaaggtgaagttcgatcagttt
gttgagcaggggcgggttctccataattatgcttctattttagagttgcttttacgactt
cgccaatgctgtgatcatccatttcttgtgttgagtcgaggtgatactcaagaattctca
gatctgaataagcttgctaaacgtttccttaagggtggtcagaagactggggaaaaccat
gttgaagatgttcccactcgtgcttatattcaagaggttgtggaagagttgcggaaggga
gaacaaggagagtgcccaatatgtctggaagcttgtgaagatgctgtgttgactccatgt
gcccatcggttatgtcgagagtgcctcttagcaagttggagaagtcctgcatctggtttt
tgtcctgtttgtagaaagactgtcagcaagcaagaactgatcacagcaccaacagatagc
cgtttccagatagatgttgaaaagaattgggtggaatcatcgaaagttactgcattgttg
catgaactagaacaactacgtgctgtaaactccaaaagcattgtttttagtcagtggact
gcctttttggacctcttgcaaattgctcttgctcggaatgatatcccttttcttcgcctt
gatgggactctaaaccagcaacagcgtgagaaagtaataaaaagattttcagaagaagat
agtgttttggtgttgctaatgtcattgaaggctggtggtgtcggaataaaccttacggca
gcatccaatgcttttgtcttggatccatggtggaatccggctgtggaggaacaagctgtg
atgcgtgtccatcgtattggacaaacaaaaagagttgcaatcaaacggttcattgtgaag
ggaacagttgaggagagaatggaggcagtgcaagccaggaaacagcgtatgatttctggt
gccctaacagaccaagaagtgcgaacagcacgaattgaggaacttaagatgcttttcaca
tag

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