Ipomoea triloba (trilobed morning glory): 116016794
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Entry
116016794 CDS
T07384
Name
(RefSeq) nuclear pore complex protein NUP62 isoform X1
KO
K14306
nuclear pore complex protein Nup62
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116016794
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
itr03019
]
116016794
Messenger RNA biogenesis [BR:
itr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116016794
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nsp1_C
FapA
CUX1_N
Lem25
Motif
Other DBs
NCBI-GeneID:
116016794
NCBI-ProteinID:
XP_031113059
LinkDB
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Position
4:complement(10055162..10061938)
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AA seq
763 aa
AA seq
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MATGFSFSNTSSSSSPFSFTSTPSAAATTSSSSPFGFSMSNPSFSTSSTSFGFGTASSAP
SFSFGSSAATTSSVTTGTTLPFGPSVGTTPTTFGANSSSGASTNIFGSGVVTPSFGSSAT
TASSATTGSTLPFGSGAFTTSNAFGASSLQTTTSVSSPMFGATTSFGASTPFGSSSGSPS
LFGTGLTSGSSSNSGTVPSTVSPFGASAPAFGASSASPTPVFSLSSASSSASSASGFLFP
TTAAGSLASSSFSSSAPTISFSSATTPSSGSSAPSFSFPTASTTSSASSAPAFSLANTSS
VTSTSSMPAFSLSSASILSSTASAVPTFSFSITPGSSSSASSASSSPFLPTSGSTFSFSN
AAGTASTTSVSSVTIPSLNSSSSGISAFSFGTSSSLQTSTLVSATSSSVASKPAALNLST
VSSPQFSTVTTTTSASIPAGSVASSAASSTGLSSTFPAVAGSSSAATSATAISGSSTTNA
PSFTVPASSFSMSLKTPSTAPSSQPQSTSLPVLGGLTSSSAGTTSVSTSAAQTSSAPIAT
TSSGTTLSTGAATGTSPKLPSEITGKTIEEVIKEWNAELQERTTNFRKQANAIAEWDRRI
LQNRDILLKLESEVAKVVETQASLERQLELIETHQDEVDKALQSMEEEAERIYKDEREML
LDDEAAYTRDAMYEQAEFVEREMEKMMEQIKSIINSLNANQGGELTDGMNPLDVVVRILN
NQLSSLVWIDEKAEDLSSRIQNLARQGSSADRGLTGPRFLFTN
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggccacgggcttctctttttccaacacttcatcatcttcctcacctttctccttcacc
tcaacccctagtgccgctgccaccacctcatcctcgtccccatttgggttttctatgtca
aaccctagcttcagtacttcatcgaccagttttggatttggcactgcctcttctgctccc
tcattttcttttggttcttctgctgccacaacttcatctgttactactggtactactttg
ccatttggacctagtgtgggtaccactccaaccacatttggagctaattccagttccgga
gcatcaacaaatatatttggatctggtgtggttaccccttcttttggttcttctgccacc
acagcttcatctgctactacaggttctactttaccatttggatctggcgcgtttaccact
tccaatgcatttggagcttcttccctccagaccacaacctccgttagttccccaatgttt
ggagcaacaacttcttttggagcttcaacaccttttgggtcttcctcaggctcaccaagt
ttgtttggtacaggtttgacctctggatcttcatctaattcaggtacagtgccctctact
gtatcaccgtttggggcatcagctcctgcttttggagcatcatcagcttcgccaacccca
gtattttcgttatcttcagcttcaagctcagcttcttctgcctctggttttctgtttccc
accacagcagctggcagtttggcatcatcttcgttttcatcttcagcaccaacaatatca
ttttccagtgctaccaccccaagctcaggatcatctgcaccatcattttctttcccaaca
gcttccaccacaagttcagcatcttcggcaccagcattttctttggccaacacctcaagt
gtgacttcaacgtcttccatgccagcattctccttatctagtgcttcaattttgagttcg
acagcatctgctgtgcctacattttcattttccattactcctggttcaagctcctctgca
tcttctgcatcttcatcacccttcctgcccacttcaggctcaacattttcattttcaaat
gcggctggaactgcttcaaccacttcagtttcttcagtcacaattcctagcttgaattca
tcatcttcgggtatatctgccttttcatttgggacttcatctagtcttcaaacatccaca
ttagtgtcagctacctcgagtagtgtagcttcaaagcctgctgctttaaacctttcaact
gtttcatcacctcagttttcaacagttactacaaccaccagtgcttcaattcctgctggt
agtgtggcatcttctgctgcttctagcactggtttgtcttcgacatttcctgctgttgct
ggttcttcttcagcagctactagtgcaactgctatttctggttctagtaccacgaatgca
ccttcatttactgtgcctgcgagctctttttcaatgtctttaaaaacaccatcaactgct
ccatcttcacaaccgcagtcaacttcattaccagtccttggtggactcacttctagttct
gctggtacaacttcagtttccacttctgctgctcaaacatcatctgctccaatagcaaca
actagtagtgggactacactgagtacaggtgctgcaacggggacctcacctaagttacca
tctgaaattaccggaaaaactatagaggaggtcatcaaggaatggaatgcagagctgcag
gagcgcacgactaatttccgaaagcaagccaatgcaattgctgaatgggacaggaggatc
ttacaaaaccgtgatatcctccttaagcttgagagtgaagttgcaaaggttgttgagaca
caggctagcctagagcgacagcttgagttaattgagacacatcaagatgaggttgacaag
gcattgcagagtatggaagaagaagctgaacggatatataaagatgagcgtgaaatgctt
cttgatgatgaagctgcatatacaagagatgcaatgtatgaacaggcagaatttgtagag
agggaaatggaaaagatgatggagcagataaagtcgatcattaattctcttaatgcaaac
cagggtggagaactaaccgatggcatgaatccacttgatgttgttgtccgcattttgaac
aatcagttgagttcactggtctggattgatgaaaaggctgaggatctctcttcacgcatt
cagaatcttgcaaggcaaggctcttctgcagatcgcggattgacaggaccgcggtttttg
tttaccaattga
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