KEGG   Ipomoea triloba (trilobed morning glory): 116016942
Entry
116016942         CDS       T07384                                 
Name
(RefSeq) elongator complex protein 2
  KO
K11374  elongator complex protein 2
Organism
itr  Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:itr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:itr03016]
    116016942
Transfer RNA biogenesis [BR:itr03016]
 Eukaryotic type
  tRNA modification factors
   Elongator complex
    116016942
SSDB
Motif
Pfam: WD40 Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd WDR55 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd EIF3I Beta-prop_WDR36-Utp21_1st Beta-prop_RIG_2nd Beta-prop_HPS5 ANAPC4_WD40 Beta-prop_Aladin Beta-prop_WDR36-Utp21_2nd NBCH_WD40 WDR90_beta-prop_4th Beta-prop_EIPR1 Beta-prop_WDR35_TULP_N WD40_RFWD3 Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st Beta-prop_WDR75_2nd Beta-prop_WDR11_1st Beta-prop_NUP159_NUP214 Beta-prop_ELP1_2nd OapA_N
Other DBs
NCBI-GeneID: 116016942
NCBI-ProteinID: XP_031113269
LinkDB
Position
4:13524888..13532939
AA seq 835 aa
MASGGGIQVGVERLFIGAGCNRIVNNVSWGASGLVSFGAQNAVAIFCPKTAQILTTLPGH
KASVNCTHWVPSSKFAFKAKQLEQHFLLSGDADGVIILWEFSLSEKKWRYVLQLPQSHKK
GVTCITAVLVSHQQSIFASTSSDGTVNVWDLALPSTYGGDCKLSCLDSLFVGRKPMVSLS
LAELPGSQHLVLAMGGLDSKIHLYCGERTGKFLPACELKSHTDWIRSLDFSLPIYTNGET
SILLVSSSQDKGIRLWKLALQDTLADHKKQEMSLASYIKGPVLVAGSSSYQVSMESLLIG
HEDWAYSVEWQPPSSSSDEGGECYQPQSILSASMDKTMMIWQPEKTTGIWMNVVTVGELS
HCALGFYGGHWSPCGNSILAHGYGGSFHLWKNVGVDCDDWKPQKVPSGHFAAVSDISWAR
SGDYVLSVSHDQTTRIFAPWTNNNCSVNGESWHEIARPQVHGHDINCVTMIQGKGNHRFV
GGADEKVARVFEAPLSFLKTLNYFTSDDHSFSDNLQVEVQILGANISALGLSQKPIYVQA
SSDAKQVSNNEGIDTMETVPEAVPVVLTEPPIEEQLGWHTLWPESHKLYGHGNELYSLCC
DHEGKLVASSCKAQSASVAEIWLWQVGSWKSVGRLHSHSLTVTQMEFSHDDNFLLTVSRD
RHFSVFSINNTGTNDTSYQLVTKQEAHKRIIWACSWSPYGHEFATGSRDKTVKIWAVENE
GSVKQLLTLPPFNASVTSLSWVGLSRHDNHGLLAVGMENGLIELWSLHNRRTEDGSPSSA
PTANLAVKLDPFMCHVSTVNRLAWRNSEKSEESNAMQLASCGADQCVRIFNICFG
NT seq 2508 nt   +upstreamnt  +downstreamnt
atggcgtccggcggcggtatacaagtgggagtggagagactgttcatcggcgctggctgc
aacagaatagtgaacaacgtttcttggggcgcctccggtttggtctcttttggtgcccaa
aacgccgtcgctattttctgccccaagaccgcacagatattaactacgcttccgggtcac
aaggcctctgtaaactgtactcattgggttcccagcagcaagtttgctttcaaagctaag
cagttggagcaacactttttgctatctggagatgctgatggtgttattattttgtgggaa
ttttctctttcagagaagaagtggaggtatgtgttacaattgccacaatcccacaaaaaa
ggtgttacatgcattactgcagtattggtttctcatcaacagtcaatttttgcatccaca
tcttcggatggtactgtaaatgtgtgggacctggctcttccatctacatacggaggtgac
tgtaaattatcatgcttggattctctctttgttggtcggaaacctatggtttctctctca
ctagcagagttgcctgggagccaacacctggtactggccatgggaggattggacagcaaa
attcatctatattgtggtgagaggactggaaaatttcttcctgcctgtgaattaaaatca
catacagactggattcggagtttagatttctccttacctatatatacaaatggggaaacc
agtattctgctggtaagttcatctcaagacaaaggaatacgcttgtggaagttggcttta
caggatacattagctgatcacaagaagcaagaaatgagcttggcatcttacattaaaggt
cctgtacttgtagccggctcatcctcttatcaggtttctatggagtctctcctcattggg
catgaggattgggcatattcagttgagtggcaacctccgtcaagttcatctgatgaagga
ggtgaatgctatcaacctcaaagcattttatctgcgtcaatggacaagacaatgatgatc
tggcaacctgaaaaaactactggcatctggatgaatgtggttactgttggagagctaagt
cactgtgccttgggattttatggtgggcactggagcccatgtggaaattcaattttagct
cacggctatggtggatcattccatctttggaaaaatgttggtgttgattgtgatgattgg
aagccacaaaaagttccttctgggcactttgcagctgtgtcagatatctcatgggctaga
agtggtgactatgttttgtcagtcagtcatgaccagacaaccagaatatttgctccgtgg
accaacaataattgttctgtgaatggagagtcgtggcatgaaattgctcgacctcaagtt
catggccatgatataaattgtgtgacaatgatccaaggaaagggaaaccaccgttttgtg
ggcggtgctgacgagaaagttgccagagtttttgaagctcctttgtcctttctgaagaca
ttgaattattttacatcagatgaccatagtttttcagataatcttcaagttgaagtgcag
attttgggtgcaaatatctctgctctaggtttatcacagaaacctatatatgttcaagct
tcatcagacgcaaagcaggttagcaataacgaaggtattgataccatggaaactgttcct
gaagcggttccagttgtcttaaccgagccacccattgaagaacaactgggctggcatact
ctatggcccgagtcgcacaaactgtatggccatgggaatgaactatattcattatgctgt
gatcacgagggaaagcttgtagcttcttcatgcaaggctcaatcagcatcagttgcagaa
atatggctttggcaagtgggttcttggaaatcggtcggccgcctgcattcacacagcttg
acagtgacacagatggagttttctcacgatgacaacttccttctcactgtttcaagggat
cgccacttttctgttttctcaattaataatacaggaacaaatgacacaagttaccagctt
gtaactaagcaggaagcacataaaagaataatatgggcatgttcgtggagcccatatggt
catgaatttgccacggggtcaagggacaagaccgtcaaaatctgggcggtagaaaatgag
ggctcggtgaagcaactcctgactctgccgccattcaacgctagcgtgacatccctatct
tgggttggccttagtcgccacgacaaccatggccttctcgcggtggggatggaaaacggt
ttgatcgagctatggagccttcacaacagaagaaccgaagatggtagcccatcgtcagcg
ccaaccgctaatcttgctgttaagctcgatccttttatgtgccacgtatccactgtcaac
cggttagcatggagaaactcggagaaaagcgaagaatccaacgccatgcaacttgcgtcg
tgtggggctgatcaatgcgtgagaatatttaacatatgttttggttga

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