KEGG   Ipomoea triloba (trilobed morning glory): 116016949
Entry
116016949         CDS       T07384                                 
Name
(RefSeq) U2 small nuclear ribonucleoprotein B''-like
  KO
K11094  U2 small nuclear ribonucleoprotein B''
Organism
itr  Ipomoea triloba (trilobed morning glory)
Pathway
itr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:itr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    116016949
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:itr03041]
    116016949
Spliceosome [BR:itr03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    116016949
 Complex B
    116016949
 Complex C
   U2 SnRNP specific factors
    116016949
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_SRRT DUF4523 RRM_ACIN1 xRRM RRM_PARP14_3 DUF6445 RRM_YTH1
Other DBs
NCBI-GeneID: 116016949
NCBI-ProteinID: XP_031113283
LinkDB
Position
4:31624420..31626594
AA seq 231 aa
MKLTGDIPPNQTIYIKNLSEKVKKEELKRSLYCLFSQYGRILDIVALKTAKLRGQAWVVF
SEVTSASNAVRQMQNFPFYDKPMRIQYAKAKSDCIAKAEGTYDKKKKQDEKAERRKRTEE
AQHSGTANGQRADANGGPAVATRQGKPGAQETTEPNNILFIQNLPHETTSMMLEVLFNQY
PGFREVRMIEAKPGIAFVEFEDDVQSSVAMQALQGFKITPQNPMAISYAKK
NT seq 696 nt   +upstreamnt  +downstreamnt
atgaagctcaccggagacataccgccgaatcaaacaatctacattaagaacttaagcgag
aaggtgaagaaagaagagttgaagaggtctctttattgtttattctcacagtatggtagg
atattggacattgtagccttgaagacagcgaagctcagggggcaggcatgggttgtcttc
agtgaagttacgtctgcaagtaatgctgtgagacagatgcagaatttcccgttttatgat
aaaccaatgcggatacaatatgcaaaagcaaagtccgattgcattgctaaagctgaaggt
acctatgacaagaagaagaagcaggatgaaaaagctgaaaggaggaaacgcactgaagaa
gcacagcattctggcactgctaatggccaaagagctgatgcaaatggaggcccagctgtt
gctacccgccaaggaaaaccgggagcacaagaaacgacagaaccaaataacatactcttc
atacagaacctgccccacgagactacgagcatgatgctggaagtgctcttcaatcagtac
cccggttttagggaagttcgaatgatagaagcaaagccaggcattgcgtttgtggaattc
gaagatgatgtccagtcctcagttgccatgcaggcccttcaaggcttcaaaattacaccc
cagaatcctatggctatctcctatgccaagaaatag

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