Ipomoea triloba (trilobed morning glory): 116016981
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Entry
116016981 CDS
T07384
Name
(RefSeq) putative late blight resistance protein homolog R1A-3 isoform X1
Organism
itr
Ipomoea triloba (trilobed morning glory)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NB-ARC
WH_DRP
AAA_22
AAA_14
LRR_R13L1-DRL21
AAA_16
NPHP3_N
LRR_14
RNA_pol_Rpc4
AAA_33
NACHT
NOA36
ABC_tran
Presenilin
Motif
Other DBs
NCBI-GeneID:
116016981
NCBI-ProteinID:
XP_031113330
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Position
4:complement(12022644..12026888)
Genome browser
AA seq
980 aa
AA seq
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MACVAVISLMRTIELEFLQPQPRPILQQKELIPCNKVLIQSLHEKLGFLIELFDENRMDG
IQAIKDLETKLRDVAFRVEYKIEFQIAKLYEDEEEEEEEEEEDEEEEEEEEEEEEEDEDE
EEEEDEEEEEEEIGIADLFVEAEETLDLGDIEAEDEEFGIADLFVEAEETLDLGDIEAKD
EEFGVADLFVEAEETLDLWDIEAEDEEFGVADLYVENPQGERSWPSCKLRRILEKAIEDI
DAIKEELAKVKHVIALQRRETALDAFTECDEEVIMLGNSSEHASHSEEIMVGKNNEFQIV
KKMLIEHSSRQREIVSIIGMGGIGKTTLTKSVYEDQSIVSYFDKRAWVVVSQHHNKRQML
TGLLKSMGCANSGTEEELAEQLYQYLLHQRYFVVIDDIWSDEAWNAVKACFPDNSNHSRV
LLTTRFAKVSTRIGSSNDFSHQMQLLDESESWNLFHEKTCKSCDVEFEAIVRPVVKKCKG
LALAIVVAAGLFSKLNTIDEWKKIAETLNSFATTSIDEECSRILSSSYNHLPYKLKACFL
YLSIFPEDKEIHVKILKKLWAAEGLIKEFESMSFDAMAEKNIQELKDRNLILVSQASSSC
GGKIKAFRMHDLLHSFCVREAKKDNLLHIVYENGCSSPLKDFRWVSIQSNNLSRHTSYFI
FRNCRSIFSFSPICTYLNLKFCSLLRVLYDIECNIGNLVHLRCLFSNGWHKNLLKPFRPW
NLQILSSHMGFDEMSILEFPQLQHFKCYYIPGDFPIFFHQNLKSIYGIGPDQCTRELFAN
IPHVKKVKVKFERQASNDYIKNLAYLHQLESLHLYGSYFCPGGYYVMNPNNHIGRLENLK
KLVFCDITFRWKAVNSLSKLPKLEVLKLLRCFCIGEEEWKLSKKEKFEQLVYLKIDAIDL
KCWEASAYQFPNLECLILSWCEKLEEIPANFAEISNLKSIKLIRCLPSAVASAKQIWEEQ
HEQGNEDMIVIEEYTRQPYY
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atggcctgtgtagctgtgatttctcttatgaggacaatagagcttgaattcttgcaacct
caacctcgtccaatcctacaacaaaaggagcttatcccttgcaacaaagtgttgatccaa
tccctccatgaaaagcttggttttctgatagagctattcgatgagaacagaatggatggc
attcaagcaattaaagacttggaaacaaaacttagagatgtggctttcagagtagaatat
aaaatcgaattccaaattgcaaagctctatgaggatgaggaagaagaagaggaagaggaa
gaggaagatgaagaggaagaggaagaggaagaggaagaggaagaagaagatgaagatgaa
gaggaagaagaagatgaagaggaagaggaagaggaaattggaatagcagatctttttgtg
gaagcagaagaaactcttgatctgggggatatagaagcagaagatgaagaatttggaata
gcagatctttttgtggaagcagaagaaactcttgatttgggggatatagaagcaaaagat
gaagaatttggagttgcagatctttttgtggaagcagaagaaactcttgatctgtgggat
atagaagcagaagatgaagaatttggagttgcagatctttatgtggaaaacccacaaggg
gaaagatcttggccttcatgcaaacttcgtcgtattttagaaaaagcaatagaagacatt
gatgctatcaaggaagagttggcgaaagtcaagcatgtcatagccttgcaaagaagggaa
acagcacttgatgcgtttactgaatgtgacgaagaagttatcatgctggggaattcttcc
gaacatgcttcacactctgaggagattatggtggggaagaacaatgagttccagattgta
aagaagatgttaattgagcattcatcaaggcaacgagaaattgtctcgattataggtatg
ggaggcattggcaagacaacattgactaagagtgtttatgaagatcagtcaattgtatcc
tattttgacaagcgagcttgggttgttgtatcccaacatcataataagagacaaatgctc
acgggtcttcttaaatcaatgggctgtgcaaatagtggcaccgaagaggagctggcagaa
caactatatcaatatttgctgcatcaaaggtactttgttgtgatagatgacatttggagt
gacgaggcgtggaatgctgtcaaagcttgctttccagataatagcaatcatagtcgagta
ttgttaactactcgctttgcaaaggtatctactcgtattggctctagtaatgacttttct
catcaaatgcagttgttagatgaaagtgagagttggaatttatttcacgaaaagacatgc
aaatcttgcgatgttgaatttgaggcaattgtaagaccagttgttaagaaatgcaaagga
ctggctttggcaattgttgtggctgcaggtttattttccaaactcaacaccatagatgag
tggaagaagattgctgaaactctaaattcatttgcaacaacaagcattgatgaagaatgc
tcaaggattctctcatcaagttacaatcacttgccttacaaattgaaggcttgtttttta
tatttgagcatttttccagaagataaagagattcatgttaaaattttgaaaaagttatgg
gctgctgaaggacttataaaggaatttgagagtatgagctttgatgcaatggctgaaaag
aacattcaagaactcaaggatagaaacttaattctggtaagccaggcaagtagttcatgt
ggaggaaaaataaaggcatttagaatgcatgatttactgcattctttttgtgtgagggaa
gctaaaaaggacaaccttctccatattgtctatgaaaatggttgcagttcccctctaaaa
gattttcgttgggtaagcatccaatcaaacaacttaagcagacatacatcatattttatt
tttagaaactgcagatccatcttcagtttctcaccaatatgcacatatttgaatttgaaa
ttttgcagtttattaagagtactctatgatattgagtgcaatattgggaatcttgtccat
ttgagatgtctattttcaaatggttggcataaaaacttgttaaaacccttccgcccatgg
aatcttcaaatactttcttcccatatggggtttgatgaaatgagcattttagagtttcca
caactacaacatttcaaatgttactatattcctggtgattttcccatattttttcatcaa
aacttgaagagcatttatgggattgggcctgatcaatgcacaagagaattatttgctaat
attccacatgtgaagaaggtaaaggttaaatttgaaagacaagcttcaaatgattacata
aaaaaccttgcctatttacaccaacttgagagtttgcatctttatggttcttacttctgt
ccggggggctattatgtgatgaatccaaataatcatattggtcgcttggaaaaccttaag
aagttggtcttttgtgatattacgtttcggtggaaggcagttaatagtcttagcaagttg
cctaaacttgaggtgctaaagctattaaggtgtttttgcattggtgaagaagagtggaaa
ctatccaagaaggagaaatttgagcaattagtttatttgaaaattgatgcaattgatctg
aagtgttgggaagccagtgcttatcaatttccgaaccttgagtgcctaatcctttcttgg
tgcgaaaaattggaagaaatcccagccaactttgcagaaatttcaaatttgaagtctatc
aaattgattcgttgtcttccttctgcggtggcttcagcaaagcaaatttgggaagagcaa
catgagcaaggaaacgaagacatgattgtcattgaggaatatacaagacagccttactac
taa
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