KEGG   Ipomoea triloba (trilobed morning glory): 116017002
Entry
116017002         CDS       T07384                                 
Name
(RefSeq) ATP-dependent DNA helicase 2 subunit KU80
  KO
K10885  ATP-dependent DNA helicase 2 subunit 2
Organism
itr  Ipomoea triloba (trilobed morning glory)
Pathway
itr03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:itr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    116017002
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:itr03400]
    116017002
DNA repair and recombination proteins [BR:itr03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA-PK complex
     116017002
SSDB
Motif
Pfam: Ku Ku_PK_bind Ku_N Ku_C
Other DBs
NCBI-GeneID: 116017002
NCBI-ProteinID: XP_031113355
LinkDB
Position
4:1252747..1256940
AA seq 714 aa
MARNREGLILVIDVGPSMHSVLPEIEKVCSVLVGKKLIYNKYDEVGVILFGTTETANELT
KEVGGYEHVTVLRSIKVVDDDLVQAVEQIPRGSVDGDFLDAVIVGMDMMIKKYGLTNKGK
KRLCLITNATCPIKDPYEGTKEDQVSTIAAQMKAHGMRMDSVIVRMKQDLDAKKGIIGEN
DFLLSVFSEKTSSKAVYVESATSLLGAIRTRNITPATLYRGDFELSNKLKIKVMVYKKTA
EERFPTLKMYSDKAPPTDKFAKHEITINYEYKVVQDPTREVPPEQRIKGYRYGPQVVPIS
SAEWEAVKFKPEKGVKLLGFSDASNIMRHYYMKDANVFIADPENSKAILAVSALARAMKD
MNRVAIVRCVWRQGQGNVTIGVLTPNVSDKGNVPDSLYFNALPFAEDVREFQYPSFSNLP
SSMLPTEQQQEAADNLVKMLDLAPSDSQEVLLPEFTPNPVLQRFYHYLELKSKHHDAAVP
PLDEMLRRITDPDPELLSRNKTVVDEFRRCFELKDNPKMKKSRRRLIREKPTGSDEEGED
LGKTAEAKRPKPIDFIEHASKVKPEKIGNINPVQDFEDMISRRDSPEWVNKAIQEMKNKI
FYLVESSHEGDTYQKALECLVALRNGCIVEQEPKQFNDLLHNLYASCKEKDLGSFCKQLE
SHGITLITKTEAPDSDILESEARSFMTSSELKAETAMKEPKEEQDIMSIYLGGK
NT seq 2145 nt   +upstreamnt  +downstreamnt
atggcccgaaacagggagggtttgattttggtgattgatgtggggccttcaatgcattct
gttcttcctgaaattgagaaggtttgctccgtgttagtgggaaagaagttgatttacaac
aagtatgatgaagtaggagttattttatttgggacaacagagactgcgaacgaattgaca
aaagaagtgggtggatatgaacatgtgacggttctgaggagtatcaaagttgttgatgat
gaccttgttcaggctgtagaacagattcctcgaggaagcgttgatggtgattttcttgat
gccgtaattgttgggatggatatgatgattaaaaagtatgggttaaccaacaaaggaaag
aagcgcctttgcctcatcacaaatgccacatgtccgattaaagatccatacgaaggaaca
aaggaagatcaagtcagcaccattgcagctcagatgaaagcacatggcatgagaatggac
tctgtaattgttagaatgaaacaagatttggatgcaaaaaaaggaattattggtgaaaat
gattttcttttgtcagtattttcagaaaaaacttcctcaaaagcagtatatgttgaaagt
gcaacttcattgttgggtgcaataagaactcgtaatataactcctgccactttatataga
ggtgattttgaactcagcaacaaattgaagatcaaggtaatggtctataagaaaacagct
gaagagagatttcccactctgaaaatgtattcagataaagcacctccaactgataagttt
gctaagcatgaaatcacaattaattatgaatataaagttgttcaagatccaacaagagaa
gtgccaccagaacaaaggattaaaggataccgatatggacctcaagtagttcccatatca
tctgctgaatgggaggcagtgaagttcaaaccagagaaaggtgtgaagcttctaggattc
tcagatgcttcgaatataatgcggcactactatatgaaagatgcgaatgtcttcatagct
gacccagaaaattcgaaggccattcttgctgtctctgcattggcaagggcaatgaaggat
atgaaccgagtagcaattgtccgctgcgtatggagacaagggcagggaaatgtaactata
ggagtccttactcctaatgtgtctgacaaaggcaatgttcctgattcattatatttcaat
gctcttcctttcgctgaggatgtgcgggagtttcaatatccatctttcagcaatcttcca
tcgtcaatgctccctactgaacagcaacaggaggctgcagataatcttgtcaagatgctt
gatcttgcaccgtctgatagtcaggaagtattgctgcctgagttcacgcctaatcctgta
ttacagcggttttatcactatcttgagttgaagtcaaagcaccatgatgctgctgtccct
ccactcgatgaaatgcttaggaggataacagatcccgatcctgaacttctttctcgaaac
aagaccgtcgttgatgaattcagaaggtgttttgaactgaaagacaacccaaagatgaag
aaatcaagaagaagattgataagagaaaaaccaactggatcagatgaggaaggagaagat
ttgggcaaaaccgctgaagccaaacggcccaaacctattgacttcatagaacatgcatct
aaagttaaacctgaaaaaattggaaacataaatcctgttcaagattttgaagacatgata
tctcgcagagatagcccagagtgggttaataaggctattcaggaaatgaagaataagatc
ttttatctagtggagagctctcatgaaggggatacatatcagaaagcattggaatgctta
gtggctctccgcaatggttgcattgttgaacaggaaccaaaacagttcaatgatttgcta
cataatctttatgcatcctgcaaagaaaaagatctcggaagcttctgtaagcaactcgaa
tctcatggaatcaccttgataaccaagacagaagcccccgacagcgatattttggagagc
gaggccagaagctttatgactagttcagagctgaaagcagaaactgctatgaaggagccc
aaagaggagcaagatatcatgagtatatacttgggtggaaaatag

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