KEGG   Ipomoea triloba (trilobed morning glory): 116017072
Entry
116017072         CDS       T07384                                 
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB2
  KO
K03144  transcription initiation factor TFIIH subunit 4
Organism
itr  Ipomoea triloba (trilobed morning glory)
Pathway
itr03022  Basal transcription factors
itr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:itr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    116017072
  09124 Replication and repair
   03420 Nucleotide excision repair
    116017072
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:itr03021]
    116017072
   03400 DNA repair and recombination proteins [BR:itr03400]
    116017072
Transcription machinery [BR:itr03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     116017072
DNA repair and recombination proteins [BR:itr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     116017072
SSDB
Motif
Pfam: Tfb2 Tfb2_C Helicase_C_3
Other DBs
NCBI-GeneID: 116017072
NCBI-ProteinID: XP_031113456
LinkDB
Position
1:complement(3648626..3654683)
AA seq 452 aa
MPQVRIVAKNFMDMVASLPAMKLDSLYDNPFICEAILRSLPPLAKKYVLQLLYIDSPIAA
KSIEEWVLADGSTKHKVAIDRLIQLRLLSETFDRKKDSSYQLNPKFQYNLRKHIVHGGIL
PREPMPSNITVRLPKLEELDAYASEQWECFLLHLISSSEAGKTINIRPSMMKVFQRGLMS
QRDDKEPPKLTESGFQFLLMDTNAQLWYIIREYITNAEESGVDSADLIAFLLELSFHVAG
EAYNTNTLTEVQRSIIRDLGDLGLVKLQQGRKESWFIPTKLATNLSISLADTSSRKQGFV
VVETNFRMYAYSSSKLHCEILRLFARVEYQLPNLIVGAISKESLYKAFQNGISSEQIVSF
LQQNAHPRVAERIPAVPENVTDQIRLWESDLNRVEMMPAHLYEEFPSRDAFEAACDFARE
YGGLLWEDSKRMRIVVKAEILANMKEFLRRKQ
NT seq 1359 nt   +upstreamnt  +downstreamnt
atgccgcaagtgaggatcgtcgcgaagaatttcatggacatggtggcttcattgcccgcc
atgaagctcgacagtctctatgataaccccttcatctgtgaagctattctcagatcactg
cctccattggcaaagaagtacgtactgcaactgctatacatagattcgccaatcgctgcc
aagtctattgaggaatgggtacttgcagatggatccactaagcacaaagtagccattgat
agactaatacagttgagactattgagtgaaacttttgacaggaaaaaggatagttcttat
caattaaatccaaagttccaatacaatcttcgaaagcacatagtccatggtggaatttta
ccaagagaaccaatgccttcaaatatcaccgtgaggcttcctaagttggaggagttagat
gcctatgcctcagaacagtgggagtgcttcctgctgcaccttataagctccagtgaagct
ggcaagacaataaacataaggccttctatgatgaaagttttccagcgtggtcttatgagt
caaagagatgacaaagagccaccaaagttgactgaaagtggatttcagtttttgctgatg
gatactaatgcacagctttggtatatcatcagggagtacataaccaatgcagaggagagt
ggcgtggattctgcagatcttattgcatttcttttggagctcagcttccatgttgcaggg
gaggcatacaacacaaacacattaactgaggtccagcgaagtataattagggaccttgga
gatctggggctggtcaagctacagcagggacggaaagagagttggtttatacctaccaaa
ttagctaccaacctctcaattagcttggcagatacatcatcaaggaaacagggatttgtt
gttgtggaaacaaacttcaggatgtatgcgtattcctcatcaaaattacattgtgagatc
ctgcgcctttttgctagagtggagtaccagcttccaaatctcattgttggtgctatttca
aaagaaagcttgtacaaagcttttcaaaacggcataagttctgagcagatagtttctttc
cttcagcagaacgcacatccaagggttgctgagagaataccagccgttccagaaaacgtc
actgaccagattaggttgtgggaatccgacctgaacagggttgaaatgatgccagcccat
ctttacgaggaattcccctccagagacgccttcgaggctgcttgcgattttgcacgagaa
tatggaggattactgtgggaggactctaagcgaatgcgaatcgtggtgaaggcagaaatt
cttgctaacatgaaagagttccttcgtcgaaagcaataa

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