Ipomoea triloba (trilobed morning glory): 116017117
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Entry
116017117 CDS
T07384
Name
(RefSeq) small nuclear ribonucleoprotein SmD1a
KO
K11087
small nuclear ribonucleoprotein D1
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116017117
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
itr03041
]
116017117
03032 DNA replication proteins [BR:
itr03032
]
116017117
Spliceosome [BR:
itr03041
]
Complex A
U1 snRNP components
Sm proteins
116017117
U2 snRNP components
116017117
Complex B
U1 snRNP components
116017117
U4/U6.U5 tri-snRNP components
116017117
Complex C
U2 snRNP components
116017117
DNA replication proteins [BR:
itr03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
116017117
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
WHD_ArnR1
EBNA2_Core
SM-ATX
Gemin7
PapD_C
Motif
Other DBs
NCBI-GeneID:
116017117
NCBI-ProteinID:
XP_031113507
LinkDB
All DBs
Position
4:complement(29467659..29469397)
Genome browser
AA seq
114 aa
AA seq
DB search
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDVSMNTHLKTVKLTPKGKNPVTMDHLSV
RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGRGRGRGRGRGRGRGR
NT seq
345 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgtcaggtttttgatgaaattgaacaatgagactgtctccatcgagctcaaa
aacggcaccgtcgttcatggaactatcactggtgttgatgtcagcatgaacacacacttg
aagactgtaaagcttacaccaaaagggaagaatcccgtgacaatggatcacctgagtgtt
aggggtaacaacattcgttattacatactgcctgacagtttaaatctcgagactttgctg
gtggaagaaacacctagggtgaagccaaaaaagcccactgctggacgaccattggggaga
gggcgaggacgagggcgcgggcgtggccgtgggcgaggtcgctag
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