Ipomoea triloba (trilobed morning glory): 116017213
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Entry
116017213 CDS
T07384
Name
(RefSeq) structural maintenance of chromosomes protein 5
KO
K22803
structural maintenance of chromosomes protein 5
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
itr03400
]
116017213
DNA repair and recombination proteins [BR:
itr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
116017213
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_29
AAA_15
ABC_tran
Motif
Other DBs
NCBI-GeneID:
116017213
NCBI-ProteinID:
XP_031113610
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All DBs
Position
4:3246254..3266809
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AA seq
1050 aa
AA seq
DB search
MAEPGPKRIKITRGEDDYMPGNITEIELHNFMTFSQLKCKPGSRLNLVIGPNGSGKSSLV
CAIALGLGGEPQLLGRASSIGAFVKRGEDNGYIKISLRGDTKEEVITIMRKIDAKNKSEW
LFNGKVVPKKHVLEIIQRYNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPRLP
VMHSSLITKSEELKRLERTIQSSKETLDQLKQANAEIEGDVERFRQRDLLLAKAEQMKMK
LPWLQYDLKKVAYKEAKNREKDAKEKVDDAAKTLNELMEPIKKQKQEKAAQDGKCKKLSD
LLDNNAEKRMGILERDNFLVVQIRGKYREMEDQRRQEESRQEKLSKALNDLRDAELELAN
LPSSELPQNKLEGLRTVTFELEVTARELRSQKLEAEKSLERNRTSSRQCQEKLKELENMN
NKRLHELRSSGAEKIFEAYRWVKEHHNEFNKDVYGPVAIEVNISSTTHANYLEGHIPFYA
WKAFITQDSADRDLLVENLKSFDVPILNYTGVGNGTRQPFQLTEEMRRLGIYSRLDQVFE
APFAVKEVLISQFGLEYSYIGSKETDQRADQISRLGIHDFWTPENHYRWIKSRYGPNVSA
MVETVNGSRLLSNMEPGEVDTLKAQKRELDKAAYTLEENLNKIKVELRNTENEGAELERQ
HERLVNAKIQDKKRRVEMEKLVEQRKLKLKSLERENDLDSTITNLSKQATELKAQRFRCA
VQLKDLLTQAAAYRRSYAEQSMASIELEFKIKDMETKVKHQEKLAEEACLHHECCKKKLE
DFRDQLSAAMRHAESIALITPELEQAFLEMPSTIEELEAAIQDTVYQANSILCLNPNALE
QYETRQRKIDSLSKKHEMDEKELSCHLNEINALKESWLPTLRDLVSQINDTFSRNFREMA
VAGEVSLDEHDMDFDKYGILIRVQFRETGKLQILSAHHQSGGERSVSTILYLVSLQDLTT
CPFRVVDEINQGMDPINERKMFQQLVRAASQRNTPQCFLLTPKLLPNLDYSDACSVLTVM
NGPWIEQASKAWINGESWRSVKGASKERCH
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcccggccctaagagaatcaagattacgaggggtgaagatgattatatgcct
ggtaacataactgagattgagcttcataatttcatgacctttagtcagttgaagtgcaaa
ccaggctcacggctaaatcttgtaattggacctaatggctctggtaagagctcacttgtt
tgtgcaatagcccttggactgggcggggaacctcagctcttgggaagggcttctagtatt
ggagcctttgtaaagcgtggggaggataatggttacattaaaatatccttgagaggggac
actaaggaggaggtaatcaccatcatgcggaagatagatgccaaaaacaagtctgagtgg
ttatttaatgggaaagttgtgcccaaaaagcatgtacttgaaatcattcaaagatacaat
atccaagtgaacaacttgactcaatttctaccacaagacagggtttgcgagtttgctaag
ttgactccagttcaacttcttgaagagaccgaaaaagctgtgggtgatcctcggttgcct
gtcatgcatagttcacttattactaagagtgaagaattgaagagactggaacgaaccata
cagagcagcaaagaaactctagatcaacttaagcaagccaatgctgaaattgaaggtgat
gttgaacgctttcgtcagagggatctacttctagcaaaggctgaacagatgaagatgaaa
ttgccctggctgcaatacgaccttaagaaagttgcatataaggaagctaaaaatcgtgag
aaagatgcaaaagaaaaggttgatgatgcagctaagacattgaatgaacttatggaacct
attaagaaacagaaacaagagaaagctgcacaggatgggaaatgtaaaaaattgagtgat
cttttggacaataatgctgaaaagcgtatgggcattttggagcgtgataactttttggtt
gtgcaaatacgtggaaagtatagggaaatggaagatcaaaggaggcaggaagaatctcgt
caagaaaagctttctaaagctctaaatgatctccgagatgctgaattagagcttgcaaat
ttgcctagttctgaacttccccaaaataaacttgaaggtttgcgcactgtaacttttgag
ctggaagtcactgcaagagaactgaggtctcagaagttggaagctgagaagtcccttgaa
agaaataggacatcctccaggcagtgtcaagagaaattaaaggaactggagaacatgaac
aacaagcgcttacatgaattgcggagctctggagctgaaaagatttttgaggcttatcgt
tgggtgaaggaacatcataatgagttcaataaagatgtctatggtccagttgcgattgag
gtaaacatttccagtacaacccatgcaaattatcttgagggtcatattccattttatgca
tggaaggcatttattacacaagattctgctgaccgtgacctcttggttgaaaacctcaag
tcatttgatgtcccaattttaaattatacaggggttggtaatggtaccagacagcctttt
caactaactgaggagatgcgtagactcggcatttattcaaggcttgatcaagtctttgag
gctccatttgctgtcaaagaagttttgattagccaatttgggctggaatattcgtatata
gggtccaaagagactgatcaaagagctgatcaaatatcacgactaggaattcatgatttt
tggacaccagagaaccattaccgttggatcaaatcaagatatggtcccaatgtttctgcc
atggtggaaactgtgaatggttctcgtcttctctccaatatggaacctggagaagttgac
accctcaaggcccagaaaagggagctggataaagctgcctatactttggaggagaactta
aataaaatcaaggttgagctaagaaacacagaaaatgaaggagcagaacttgaaagacaa
catgagaggcttgttaatgctaaaattcaagacaagaagagaagagttgaaatggaaaag
cttgttgagcagcggaagttaaagctaaaatctttggaacgagagaatgatttggatagc
accattactaacttaagtaaacaggctacagaactgaaggctcagagattccggtgtgca
gttcaactcaaggatttactcactcaggctgctgcttatcgaagaagttatgctgaacag
agcatggcttcaattgagcttgagtttaagattaaagatatggaaaccaaagtgaagcac
caggaaaagttggctgaggaagcatgtttgcatcatgagtgctgcaaaaagaaattggag
gatttccgtgatcaattatcagctgccatgaggcatgctgaatccatcgcattgataact
cctgaattggaacaggcattccttgagatgccttccaccattgaagaattggaggctgct
attcaagacactgtttatcaagccaattctattctttgtcttaaccctaatgccctcgaa
caatatgagactcgccaaagaaaaatagattccctttcaaagaaacatgaaatggatgaa
aaggaattaagttgtcatttaaatgaaattaatgctctaaaggaaagttggcttccaaca
ttgagagaccttgtctctcagataaatgacactttcagtcgtaattttagagaaatggct
gttgcaggagaggtttcattggatgaacacgatatggactttgataaatatgggattcta
attagagttcaattcagggaaacaggaaaacttcaaattcttagtgcccaccaccaatct
ggaggggagcgctctgtttcaactattctttaccttgtttctcttcaagacctaaccact
tgcccttttagagtggttgatgaaataaatcaaggaatggatccaattaatgaaaggaaa
atgtttcagcaattagtcagagcagccagccaacgcaatacaccacagtgtttcctactt
accccaaaactattgccgaatctagactatagcgatgcatgcagtgttctcactgtaatg
aatgggccatggattgagcaggcttcaaaagcctggatcaatggagaaagctggagatca
gtgaagggggcatcaaaagagaggtgtcactag
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