KEGG   Ipomoea triloba (trilobed morning glory): 116017368
Entry
116017368         CDS       T07384                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7-like
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
itr  Ipomoea triloba (trilobed morning glory)
Pathway
itr03020  RNA polymerase
itr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:itr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    116017368
  09124 Replication and repair
   03420 Nucleotide excision repair
    116017368
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:itr03021]
    116017368
   03019 Messenger RNA biogenesis [BR:itr03019]
    116017368
   03400 DNA repair and recombination proteins [BR:itr03400]
    116017368
Transcription machinery [BR:itr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     116017368
Messenger RNA biogenesis [BR:itr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     116017368
DNA repair and recombination proteins [BR:itr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      116017368
SSDB
Motif
Pfam: S1 SHS2_Rpb7-N
Other DBs
NCBI-GeneID: 116017368
NCBI-ProteinID: XP_031113807
LinkDB
Position
4:32330276..32332711
AA seq 160 aa
DSIYLLYLLKILEPLKFWIFYSGRHGFIVAITGIESVGKGLIRDGTGFVTFPVKYQCVVF
RPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDAPNYTTSDGSVKIQ
KDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGAAV
NT seq 483 nt   +upstreamnt  +downstreamnt
gattcaatttatctgttgtatttactcaaaattttagaacccctaaagttttggatcttc
tatagtggacggcatggtttcatagtagcgatcactggcatcgagagtgtcggaaaaggt
ctcatccgcgacggtacggggttcgtcactttcccagtgaagtatcagtgcgttgtgttt
cggcctttcaaaggggagattctagaagctgttgttactatggtgaacaagatgggcttc
ttcgctgaagcagggcctgtgcagatttttgtctctaatcatttaataccagatgacatg
gagtttcagtctggagatgcgccaaactacacaacatctgatggatcggttaaaattcaa
aaggatagtgaagtacgactaaagatcattggaactcgtgttgatgctacagaaatcttc
tgcattggtacaattaaggacgatttcttgggtgtcatcagtgatcccggagcagctgtt
tga

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