Ipomoea triloba (trilobed morning glory): 116017591
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Entry
116017591 CDS
T07384
Name
(RefSeq) probable helicase CHR10 isoform X1
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
itr03036
]
116017591
Chromosome and associated proteins [BR:
itr03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
116017591
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
SLFN-g3_helicase
AAA_14
Motif
Other DBs
NCBI-GeneID:
116017591
NCBI-ProteinID:
XP_031114059
LinkDB
All DBs
Position
4:1719133..1727105
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AA seq
924 aa
AA seq
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MNYEQQLIAAAKYIHGDDSTAVDAPLISSADLGVKATLKPHQVEGVSWLIRRYRLGVNVI
LGDEMGLGKTLQAISLLSYLKVSQKSNGPFLILCPLSVTDGWKCELSNFAPKLKVTHYVG
EKEHRRSLRRKMYEHASKESKESLPDVLQMPSLPFDVLLTTYEIALIDQEFLSQVPWHYV
IIDEAQRLKNTSSVLYNVLKEQFLMPRKLLMTGTPIQNNLSELWALMHFCMPSIFGTSEQ
FLSAFKEAGDPSCYNAEKVKGQLKILKYILAAFMLRRTKNQLIESGTLVLPSLTEITVMA
PLVALQKKLYMSILRKELPQLLALSSGGSTRSLQNIVIQLRKACSHPYLFPGIEPEPYEE
GEHLVQGSGKLLVLDHLLQKLHASGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIR
AEERFAAIRSFGQRSAKGSSDSEADQQGAFVFMISTRAGGVGLNLVAADTVIFYEQDWNP
QVDKQALQRAHRIGQMKDVLSIHLVTRRTVEEVIMRRAYRKLQLSHNIIGEDTIDRSEKE
TEGVEAGDLRSIVLGLQMLDPMDMSKENFDKVDMSELTAMAEKVISFRKQQQLDKFDKKF
EINCMDIVNGSCSITEGVSDPVDNDPVEDENSYQSWIEKFKEALQANNTPIMELGSRRRL
VEENHLKAEAARKRAEEKKLSEWEALGYHSLSVKDPVCPDDKDIKSDSGSVHFVYGDCTL
PSKVCPSEPTVIFSCVDDSGNWGHGGMFNALARLSASIPMAYERASEFGDLHLGDLHLIE
IRDDCNGDSNDNTSPHIPQWVALAVVQSYNPRRKVPRSNISIPSLEDCLLKASYVAAQKS
GIFGFYYLMMLLFILYSYEMMSVQWVHLATATLISRSHCVNPPPPLPLMFANRIILLFML
FLDFSSLPLAACGTLVFELFVAHR
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgaattacgagcagcaactcatagcggcggcgaagtacatacacggcgatgactcaacc
gccgtagacgctccgcttataagctccgccgacttgggagtcaaagcgacgctcaagccg
caccaagttgaaggagtctcatggctcatccgaagatatcgtctcggcgtcaatgtcatt
ctcggggatgagatgggattgggaaagacactgcaagcaatatcgctcttgagctactta
aaggtttcacagaagtctaatgggccgtttttaatactatgcccacttagtgtgactgat
ggatggaagtgtgagttatctaattttgctccaaagctgaaagtaacccactatgttggg
gagaaagagcatcgccgcagtctgcgtaggaaaatgtatgagcatgcttccaaggagtcc
aaggagtcactgcctgatgtcttacagatgccatcattaccatttgatgttctattgaca
acttatgagattgcattgattgatcaagaatttctttcccaagttccatggcattatgta
ataattgatgaagcacaaagattgaagaatacgagcagtgtcttgtacaatgtcctcaaa
gagcagtttttgatgccacgaaaattactgatgactggcacacctatacagaacaatctt
tctgaactttgggcattgatgcacttctgtatgccttcaatttttggaacatcagagcag
ttcctctctgcattcaaggaagctggagatccttcatgctataatgcagaaaaagtcaag
ggacaactcaaaattttgaaatatatacttgcggcctttatgcttagaagaactaaaaat
caactgattgaatctggaactcttgtactgccatctcttactgagataacagtgatggca
cctttggtggcactgcagaagaagttatatatgtcaatattgaggaaggaattaccccag
ttgctagctctttcttctggaggctcaactaggtcattacagaatattgtaatacagcta
agaaaagcatgtagtcacccttacctttttcccggtattgagcctgaaccatatgaagag
ggtgagcacctggttcagggcagcggcaagcttctagttttggatcatctactccagaag
ttgcatgcttctggacatcgtgttcttctttttgctcagatgacccaaactcttgatata
ctccaggattttctggaactgagaaaatattcatatgagcgtcttgatggttcaattcgg
gcagaggaacgatttgctgcaataagaagttttggccagagatcagccaaaggaagttca
gattcagaagctgatcagcagggagcatttgtctttatgatttcaacaagagctggaggg
gttggattgaatctcgtggctgctgatacagtcatattttatgaacaggattggaatccc
caggtggacaagcaggctctgcagcgtgctcaccggattggtcaaatgaaggatgtttta
tccattcacttagttaccaggaggacagtggaggaggtcattatgcgaagggcatatcga
aagctacagctgagccacaatattataggagaggatactatagataggagtgagaaagag
acggaaggagtggaagctggtgatttgcgatccattgtacttggcttacagatgctagat
cctatggacatgagcaaagaaaactttgataaggtggatatgagtgagttaactgcaatg
gctgaaaaagtaatttcattccgcaagcagcaacaattggacaagtttgacaagaagttt
gagataaattgtatggacatagtcaatggcagttgttctatcactgagggagtttcagat
cccgttgataatgatcctgttgaagatgagaattcatatcaatcttggattgaaaagttc
aaggaagcattgcaggcaaataatactccaattatggagctgggaagtaggagaagatta
gtagaggagaatcatcttaaagcagaagctgcaaggaaaagggcagaggagaaaaaactg
tctgaatgggaagctctaggctatcattcattgtctgtgaaagatccagtgtgccctgat
gataaggatattaaatcagattctggttctgtccattttgtttatggggattgcacactt
ccctcaaaggtgtgtccatcagagcctacagttatattcagctgtgttgatgactcagga
aactggggccatggaggaatgtttaatgcacttgctaggctttcagcaagcatccctatg
gcatatgaacgagcttctgaatttggtgatctgcacttaggtgatctccatcttatagaa
ataagagatgattgtaatggtgacagtaatgacaatacctcacctcatattcctcaatgg
gttgctttggctgttgtgcaatcatacaatcctaggagaaaagtccccaggagtaatata
tctatcccgagcttagaagattgcctgttgaaagcatcttatgtggctgctcagaagtct
ggtatttttggtttctattatctcatgatgttgctatttatcttatattcttatgaaatg
atgtcagtgcagtgggttcatttagcaactgcaactttgatttccaggtctcattgtgta
aacccgcccccacctcttcccttgatgtttgccaatagaattattctgctgtttatgtta
tttctcgatttctcatccttgcctttagctgcctgtggaacacttgtgtttgagctcttt
gttgcacatagatga
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