Ipomoea triloba (trilobed morning glory): 116017782
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Entry
116017782 CDS
T07384
Name
(RefSeq) DNA mismatch repair protein MSH4-like
KO
K08740
DNA mismatch repair protein MSH4
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
itr03036
]
116017782
Chromosome and associated proteins [BR:
itr03036
]
Eukaryotic type
Meiosis-specific proteins
Others
116017782
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
Stonustoxin_helical
TagH_C
Motif
Other DBs
NCBI-GeneID:
116017782
NCBI-ProteinID:
XP_031114276
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Position
4:13238681..13255016
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AA seq
792 aa
AA seq
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MEDDNGERSSFVIGLIENRAKEVGVAAFDLRSASLHLSQYIETSSSYQNTKTLLEFYEPM
VIIVPPNKLAADGMVGVSQLADRFFSTIRKVIMARGCFDDTKGAVLIKNLAAKEPSALGL
DSYYKQYYLCLAAAAATIKWTEAEKGVIVTNHSLLVTFNGSFDHMNIDSSSVQNLEIIEP
MHSGLLGTSNKKRSLFQMLKTTKTFGGTRLLRANILQPLKDIETINARLDCLDELMSNEQ
LFFGLSQALRKFPKEIDRVLCHFCFKPKKVTNEVLATDNARRSQNLISSIILLKTALDAL
PLLSNVLKDAKSFLLRNVYESTCENEKYASIRKRIGEVNDEDVLHTRVPFVARTQQCFAV
KAGVDGLLDMARRSFCDTSEAIHNLAIKYREDFKLPNLKIPFNNRQGFYFSIPQKSIQGK
LPKKFIQVIKHGNYIHCSSLELASLNVRNKSASKECYIRTELCLEALMDAIRQDVSVLTL
LSEVLCLLDMIVNSFAHMISTKPVDQYTRPQFTYDGPLAIDSGRHPILESIHNDFIPNNI
FLSEASNVVIVMGPNMSGKSTYLQQVCLIVILAQIGCYIPAHYATLRVIDRIFTRMGTID
CLESNSSTFMTEMKETAFIMQNISKRSLVVMDELGRSTSSSDGFAMAWSCCEHLLALKAY
TIFATHMENLSELAIIYPNVKILHFYVEVKNNRMDFKFQLRDGQLHVPHYGLMLAGVAGL
PSSVIETAKRITSTITQKKTKRLEVNCQQYRDIQMIYRVSQRLICFKYSNQDEDSLRESL
QNLKESYISGNI
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgacaatggagagagatcaagcttcgttatcggcctcattgagaatcgcgcc
aaggaggttggagtagctgcttttgacttaagatcagcttcactgcatctttctcagtat
attgagactagcagttcctatcagaatacaaagacactgctagagttctatgaacctatg
gtaatcattgttcccccgaataaattggccgctgatggtatggttggggtctcccaacta
gctgacagatttttttccacaataaggaaggtcataatggcacgtggctgctttgatgat
accaagggagctgtgctgataaaaaacttagctgccaaagaaccatctgcgcttggttta
gactcatattacaaacaatactatctatgcttggctgctgcagcagcaaccattaagtgg
acagaagcagagaaaggggtcattgttacaaatcactcattgctggtcacctttaatgga
tcatttgaccacatgaatattgattcttccagtgtccagaacttggagataatagagcca
atgcactctggccttttggggacaagcaacaagaagagaagcctattccaaatgcttaag
acaaccaaaacttttggagggactagacttcttcgggcaaatattttgcagccattgaaa
gacattgaaactattaatgctcgacttgactgcctggatgagttgatgagcaatgagcag
ctgttttttggcttgtctcaagctcttcgtaagtttcccaaggaaatagatagggtcctt
tgccacttctgctttaagccaaaaaaggtcacgaatgaagtcttggccactgataatgca
cgaaggagccaaaatttgatatcaagtattattcttctcaaaacagctctggatgccttg
ccgttactctccaatgtgcttaaagatgccaagagttttttgctcagaaatgtttacgag
tccacatgtgaaaatgagaaatatgcctccataaggaaaagaattggggaggtgaatgat
gaagatgtgcttcatactcgggttccctttgttgctcggacacagcagtgctttgctgta
aaggctggagttgatggacttcttgacatggcacgaagatcgttttgtgataccagcgaa
gcaattcacaaccttgcaattaagtaccgtgaagattttaaactaccaaatttgaaaatc
ccattcaataacaggcaaggattttattttagcattccacaaaagagtatacaaggaaaa
cttcccaaaaagttcatccaggttataaagcacggtaactacatacattgttctagtctg
gagcttgcttcattgaatgtgcggaacaagtctgcaagtaaggaatgttatataaggact
gaactttgcttggaagcactaatggatgctatacgccaggatgtttctgtgcttacactt
ctttctgaagtcctatgccttctagacatgatagttaactcatttgctcatatgatttca
acaaaacctgttgatcaatatactagacctcaatttacttatgatggtccattagcaatt
gattctggaaggcaccccattctagaaagcattcacaatgatttcattcccaacaatatc
tttctctctgaagcatcaaatgtggtaattgtgatgggacctaacatgagtgggaaaagt
acttatcttcaacaagtttgtcttattgtcattcttgcgcaaattgggtgttacattcct
gcccactatgccactttgagggtgattgatcgaattttcacaaggatgggaactattgac
tgccttgaatccaactctagcacgttcatgacagagatgaaagagacagcttttataatg
caaaacatctccaagagaagtcttgttgtgatggatgagttggggaggtcaacttcttca
tctgatggatttgcaatggcttggagctgttgtgagcatctattggcactgaaagcgtat
actatatttgctacccatatggaaaatttgtcagagcttgccatcatctacccgaatgtg
aaaattcttcatttttatgttgaagtgaaaaacaaccggatggatttcaagtttcaacta
agagatggacaacttcacgttccacattatggccttatgctagcaggtgtggctggtttg
ccaagttcagtgattgaaactgccaaaagaattacatcaacgattactcagaagaaaaca
aagagactggaggtgaattgccaacaataccgtgacattcaaatgatctaccgtgtttct
caacgtctgatatgctttaagtattctaatcaagacgaagattctctaagggaatctttg
cagaatcttaaagagagttacattagtggaaatatttag
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