KEGG   Ipomoea triloba (trilobed morning glory): 116017808
Entry
116017808         CDS       T07384                                 
Name
(RefSeq) CDK-activating kinase assembly factor MAT1 isoform X1
  KO
K10842  CDK-activating kinase assembly factor MAT1
Organism
itr  Ipomoea triloba (trilobed morning glory)
Pathway
itr03022  Basal transcription factors
itr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:itr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    116017808
  09124 Replication and repair
   03420 Nucleotide excision repair
    116017808
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:itr03021]
    116017808
   03400 DNA repair and recombination proteins [BR:itr03400]
    116017808
Transcription machinery [BR:itr03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     116017808
DNA repair and recombination proteins [BR:itr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     116017808
SSDB
Motif
Pfam: MAT1 NAD_binding_9 DUF569 DUF5962
Other DBs
NCBI-GeneID: 116017808
NCBI-ProteinID: XP_031114306
LinkDB
Position
4:25748983..25760694
AA seq 188 aa
MVVASGGHSFAKEMAIRKRIANIYNKREDDFPSLREYNDYLEEVENMICDLVEGIDVPAI
EARIAEYQKENAEQIMIAQARKAEELAAALSKGPARNDGDTAANQSSQAGPSTVPQGHYA
PAIAGGAIGQPRPTQPVPIGSTHDMFGLEVEDEEKLRERAERAARAGGWSVEISRKRALE
EAFASLWV
NT seq 567 nt   +upstreamnt  +downstreamnt
atggtggtggcatcgggaggccattccttcgccaaggaaatggccatacggaagcgcatt
gccaatatatataacaaaagagaagatgattttccatcattacgggaatacaatgattat
ttggaggaagtagagaatatgatatgtgatttggttgaaggaatagatgttcctgctatt
gaggcaaggattgctgaataccaaaaagaaaatgcagaacaaatcatgattgctcaagct
cgtaaggctgaggagttagcagcagccttaagtaagggacctgcacgaaatgatggtgat
acggcagcaaaccaaagttctcaagctgggcctagtactgtgccgcagggacattatgct
ccagcaattgctgggggagctattggccaaccacgcccaacacaacctgtcccaattgga
tccactcatgacatgtttgggctagaggttgaagatgaagaaaagctgagagaacgagct
gaaagagctgcaagggctgggggatggagtgtagaaataagccgtaaaagggcacttgaa
gaagcttttgcaagcctttgggtctga

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