KEGG   Ipomoea triloba (trilobed morning glory): 116017819
Entry
116017819         CDS       T07384                                 
Name
(RefSeq) suppressor of mec-8 and unc-52 protein homolog 1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
itr  Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:itr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:itr03041]
    116017819
Spliceosome [BR:itr03041]
 Complex B
  Other components
   Complex B specific factors
    116017819
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd WD40_CDC20-Fz EIF3I Beta-prop_EML_2 WDR55 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st Beta-prop_EML WD40_Gbeta LisH_TPL ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_Aladin Beta-prop_ACSF4 Beta-prop_IFT122_1st Beta-prop_NWD2_C Beta-prop_Nup120_160 Beta-prop_VPS8 Beta-prop_SCAP Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Ge1_WD40 Beta-prop_WDR41 Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_WDR35_TULP_N Beta-prop_NUP159_NUP214 DUF7165 Beta-prop_WDR75_2nd Beta-prop_HPS5 VPS8_N Beta-prop_WDR19_1st Beta-prop_LRRK2 Beta-prop_IFT122_2nd zf_topless Beta-prop_IP5PC_F
Other DBs
NCBI-GeneID: 116017819
NCBI-ProteinID: XP_031114323
LinkDB
Position
4:26485652..26494421
AA seq 514 aa
MSSTLEIEARDVIKIVLQFCKENSLHQTFQTLQNECQVSLNTVDSLETFVADINGGRWDA
VLPQVSQLKLPRKILEDLYEQIVLEMIELREIDTARSILRQTQVMGVMKQEQPERYLRLE
HLLVRTYFDPHEAYQDSTKEKRRAQISQALATEVSVVPPSRLMALIGQALKWQQHQGLLP
PGTQFDLFRGTAAMKQDEEDMYPTTLGHTIKFGKKSHPECARFSPDGQFLVSCSVDGFIE
VWDHISGKLKKDLQYQADETFMMHDDAVLCVDFSRDSEMLASGSQDGKIKVWRIRTGQCL
RRLERAHSQGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTN
DGSRVITASSDCTVKVWDLKTTDCLQTFKPPPPLRGGDASVNSVHLYPKNTDHIVVCNKT
SSIYLMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSYQSGKLEHL
MKVHEKDVIGLTHHPHINLVATYGEDCTMKLWKP
NT seq 1545 nt   +upstreamnt  +downstreamnt
atgtcttccacccttgaaatagaagctcgagatgtaattaagatagttcttcaattctgc
aaagaaaattctttgcatcaaactttccaaacattacaaaatgagtgccaggtttctctc
aacacagtggatagccttgaaacttttgttgctgatattaatggtgggagatgggatgca
gtattacctcaggtctcacagctcaagcttcctagaaaaatactcgaggatttgtatgag
cagattgttttagaaatgatagaactccgggagatagatactgcacgttctattttgagg
caaacacaagtgatgggtgtcatgaagcaggaacaaccagagagatatctacgacttgag
catctattagttcggacttactttgatccgcatgaggcttatcaagattcaacaaaagag
aaaaggcgtgcacaaatatcccaagctcttgctacagaggtttctgttgtccctccttca
cgactaatggctttgatcggtcaagcgttgaagtggcagcagcatcaaggattacttcca
cctggaacacaatttgacttgttccggggaacagctgctatgaaacaggacgaagaggat
atgtatcccacaactcttgggcacactattaagtttgggaagaaaagccacccagaatgt
gctaggttctccccagatggacaattccttgtttcctgctctgttgatggatttattgag
gtatgggaccacattagtggaaaattaaagaaggatcttcagtatcaggctgatgaaaca
tttatgatgcatgatgatgctgtgctttgtgttgattttagcagagactctgagatgctt
gcatctggatctcaagatggaaaaataaaggtgtggcgtataagaactggtcagtgcttg
cgccgtcttgaacgagcacattctcagggtgtcactagtcttgtcttctctagagatgga
agtcagatcttgagcacatcgtttgacagcaccgccagaatccatggcctgaaatctggg
aaattattaaaagaattccgtggccactcatcttatgtgaatgatgctatttttactaat
gatggatctcgagtcatcacggcatctagtgattgcacagtgaaggtttgggatttgaag
accacagactgtctacagaccttcaaacctccacctcctttgaggggaggcgatgcatct
gtaaattctgttcatctttatcccaagaatacagatcatatagttgtgtgtaacaagaca
tcatcaatatacctgatgacccttcaagggcaggttgtcaaaagtttctcatctggtaag
agagaaggcggtgattttgtggcagcctgtgtatcgcccaaaggagaatggatatactgt
gtcggtgaagacagaaacctgtactgctttagctatcaatctggcaaactggaacatttg
atgaaggtgcatgagaaggatgtgattggtctcactcaccatccccatataaaccttgtt
gccacttacggtgaagactgcaccatgaaattatggaagccgtaa

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