KEGG   Ipomoea triloba (trilobed morning glory): 116017871
Entry
116017871         CDS       T07384                                 
Name
(RefSeq) UBP1-associated protein 2A-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
itr  Ipomoea triloba (trilobed morning glory)
Pathway
itr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:itr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    116017871
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:itr03019]
    116017871
   03041 Spliceosome [BR:itr03041]
    116017871
Messenger RNA biogenesis [BR:itr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     116017871
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     116017871
Spliceosome [BR:itr03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    116017871
SSDB
Motif
Pfam: RRM_1 RRM_7 Cut8 RRM_Nup35
Other DBs
NCBI-GeneID: 116017871
NCBI-ProteinID: XP_031114384
LinkDB
Position
4:35051341..35056048
AA seq 493 aa
MAKKRKSRASYQPEIEPEPTQIQEPEQPQPEPDPQLEAPNEEPEQEVEEEVEEEEVEEVE
EEEVEEADPEEEEEEEEEGEEEEKPESMEADVSKSDANPSNDAVSTGKANGEEKKAEVEE
FDDEPLEKVLEPFSKEQLQVIIQEAVTKHPDFMENIRNWADKDPAHRKIFVHGLGWDTTT
ETLTNVFGKYGEIEDCKAVTDKVSGKSKGYAFILFKHRSGARKALKEPQKKIGNRITSCQ
LASAGPVPAPPPNPPPVSEYTQRKIFVSNVSADLDPKKLLEFFSKYGEIEEGPLGLDKHT
GKPKGFCLFVYRSVESAKKVLEEPHKIFEGHTLNCQKAIDGPKQNKNYSQQQQHQPHYPQ
HQQHHYYQHTAKKGKYSSGGGGGSGATSAGHLMAPAAGPGAVGFNPAVAPVLGQALTALL
TTQGAGLGIGNLLGGLPVNPHGVPPVVNNAPGYGAQSAPGGYGGHPGMQGGYQNPAMGQG
GVRPQGGAPWRGH
NT seq 1482 nt   +upstreamnt  +downstreamnt
atggccaagaagcggaagagccgagcttcataccagcccgaaatcgaaccagaaccgacc
caaattcaagagccggagcagccccaacccgagcctgacccccaactggaagcacccaat
gaagaaccagaacaagaggtagaagaagaagtagaagaagaagaagtggaagaggtagag
gaagaggaagtagaagaagcggatccagaagaagaggaagaggaagaggaagagggcgaa
gaagaggagaagccggaaagtatggaagcagatgtttcgaaaagcgatgcaaacccgtca
aacgatgccgtttcaactggaaaagctaacggcgaggagaagaaggctgaggtggaggaa
ttcgacgatgagccactcgagaaggttctggaaccattctcgaaggaacagcttcaagtc
ataattcaggaggccgtgaccaaacacccagatttcatggaaaatattaggaattgggcc
gataaagatccagcacaccggaaaattttcgtgcacggtcttggttgggatacaacaact
gaaaccctaaccaatgtctttgggaaatatggggagattgaggattgcaaggccgttacc
gataaggtctcagggaagtctaaaggttacgcctttatacttttcaagcaccggagtgga
gccaggaaagctttgaaagagccccagaagaagattgggaatcggattacctcatgccag
ctggcttcagctgggcctgtgccagcccctcctccaaacccccctcctgtttcagagtat
acccagaggaagatttttgttagcaatgtttcagcagacttggaccccaagaagttgctt
gagttcttttccaaatatggtgagattgaggaaggacctctggggttggacaagcataca
gggaaaccaaaaggtttctgtttgtttgtttacaggtctgttgagagtgcaaagaaggtg
ctagaggagcctcataagatttttgaggggcatacactgaattgccagaaggcaattgat
gggccaaagcagaataagaattattcacagcagcaacaacatcagccacattatccccaa
catcagcaacatcattattatcagcacacagctaagaaggggaaatattcttctggtggt
ggtggtggaagtggagctacttcagcaggacatttgatggctccagctgcagggcctgga
gctgttgggttcaatccagctgtggcccctgttcttggacaggcactcactgcattgctt
acaacacaaggagctggactagggattggtaatctgcttggaggacttcctgtgaatcct
catggggttccacctgtggtgaacaatgcaccgggatatggggctcagagtgccccagga
ggctatggaggtcatccaggaatgcagggaggctatcagaacccagctatggggcaggga
ggagtgaggccacaaggtggtgccccctggcgtggtcattag

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