Ipomoea triloba (trilobed morning glory): 116019050
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Entry
116019050 CDS
T07384
Name
(RefSeq) protein mago nashi homolog
KO
K12877
protein mago nashi
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03013
Nucleocytoplasmic transport
itr03015
mRNA surveillance pathway
itr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116019050
09122 Translation
03013 Nucleocytoplasmic transport
116019050
03015 mRNA surveillance pathway
116019050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
itr03019
]
116019050
03041 Spliceosome [BR:
itr03041
]
116019050
Messenger RNA biogenesis [BR:
itr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
116019050
Spliceosome [BR:
itr03041
]
Complex C
Other components
EJC/TREX
116019050
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mago_nashi
Motif
Other DBs
NCBI-GeneID:
116019050
NCBI-ProteinID:
XP_031114984
LinkDB
All DBs
Position
5:1223381..1225927
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AA seq
148 aa
AA seq
DB search
MEESDEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFLTPAVLK
ECRRIVADSEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLMDVQTSKDPEG
LRIFYYLVQDLKCFVFSLISLHFKIKPI
NT seq
447 nt
NT seq
+upstream
nt +downstream
nt
atggaagagagcgacgagttttacctgaggtactacgtgggtcacaagggaaaattcggc
cacgagttcctcgagttcgaattccgacccgacggcaagctccgctatgccaacaactcc
aactacaagaacgacaccatgattcgcaaggaggtcttcctcacccccgccgttctcaaa
gaatgccgccgcatcgtcgccgatagcgagatcatgaaggaagatgacaacaattggcca
gaaccagaccgtgtggggcgacaagagctcgagattgtgatggggaatgagcacatatct
tttactacgtctaagattggttctctgatggacgtgcagaccagtaaagatccagaagga
cttcgcatcttttattatcttgttcaggatctgaagtgtttcgtgttctctctcatctcc
ctccacttcaaaatcaaaccaatataa
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