Ipomoea triloba (trilobed morning glory): 116019084
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Entry
116019084 CDS
T07384
Name
(RefSeq) double-strand break repair protein MRE11 isoform X1
KO
K10865
double-strand break repair protein MRE11
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03440
Homologous recombination
itr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
116019084
03450 Non-homologous end-joining
116019084
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
itr03032
]
116019084
03400 DNA repair and recombination proteins [BR:
itr03400
]
116019084
DNA replication proteins [BR:
itr03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
116019084
DNA repair and recombination proteins [BR:
itr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
116019084
BRCA1-C complex
116019084
NHEJ (non-homologous end-joining)
MRX complex
116019084
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mre11_DNA_bind
Metallophos
EBNA2_Core
Motif
Other DBs
NCBI-GeneID:
116019084
NCBI-ProteinID:
XP_031115033
LinkDB
All DBs
Position
1:complement(19488635..19497517)
Genome browser
AA seq
719 aa
AA seq
DB search
MGDSSREDEKNTLKILVATDCHLGYLEKDEIRRHDSFQSFEEICSIAEKNQVDFLLLGGD
LFHENKPSRTTLVKAIEILRRYCLNDQPVQFQVVSDQTINFANVFGHVNYEDPHFNVGLP
VFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMDLGGSGVGQISLYPILIRKGSTSVA
LYGLGNIRDERLNRMFQTPHAVQWMRPEAQEECQLSDWFNILVLHQNRVKTNPKNAINEH
FLPRFLDFIVWGHEHECLVDPQEVPGMGFHITQPGSSVATSLIDGESKPKHVLLLEIKGN
QYRPTKIPLKSVRPFEYTEIVLKDEPDIDPNDQNSILEHLDNVVRKLIERSIAISGSENK
LPLVRVKVDYSGFMTINPQRFGQKYVGKVANPQDILIFSKSSNRGRSAVKIEESERLRPE
ELNQQNIEALVAESNLKMEILPVNDLDVALHSFVNKDDKMAFYSCVQYNLKETRNKITRD
SDTLKFEEEDIILKVGECLEERVKERAVQNKDDQPFSFSGQSSEIRSKSIRGIESAVSFS
DDEDTTPFSASKSTANKGKKELSQSFRSSHDASEVGKTSRGRGRGRGRGRGRASSNLKQT
TLDMGFRHSQISSSVRSIAEDEENVDSDSSDEKAENEINDVDDSLDDETLQGKGRKRAAP
RGKGRGSTSSAKRGKKSDNAPSIQRMLMNLDDEDDDDEVPKKSNKPPPRVTRNYGALRR
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgggtgattcttccagggaagatgagaaaaatacacttaagatacttgtggctacggat
tgtcacttgggttatttggagaaggatgaaatacgtaggcatgattcatttcagtcgttt
gaggagatatgttctatcgcagagaaaaatcaggtggactttttgcttcttggaggtgat
ctttttcatgagaataaaccatccaggactacattagttaaagccatcgagattctgcgt
cggtactgtctcaatgatcaaccagtgcagttccaagttgtcagcgatcagacaataaac
tttgcaaatgtatttggtcatgtaaactatgaagatcctcactttaatgttggattgcca
gttttcagtattcatgggaatcatgatgatcctgcaggcgtggacaacctttctgctgtt
gatattctttcagcatgcaatcttgtgaattattttggaaaaatggatcttggaggttct
ggtgttgggcagatatctctctaccccattctcatcaggaagggttcaacatctgtagcc
ctctatggacttggtaatataagagatgagcgcttgaataggatgtttcagacacctcat
gccgttcaatggatgcgacctgaggctcaagaagagtgtcaattgtcggactggttcaac
atcctggttcttcatcagaacagagtaaagacaaatcctaaaaatgcaataaatgagcat
ttcctgcctcgctttctggatttcattgtatggggccatgaacatgaatgtctggttgat
cctcaggaagttccaggtatgggtttccacattactcagcctggctcttctgttgcaaca
tcactgattgatggtgaatcaaaacctaaacatgtgctccttttggagattaagggaaat
caatatcgcccgacaaagatacctcttaagtcagtgcggccttttgaatacactgagata
gttttgaaggatgagccagatattgatccaaatgatcaaaactcgatacttgaacatttg
gacaatgtggtcaggaagttgatagaacgatctattgctataagtggatcagagaacaag
ctccccttagttcgagtaaaggtagattactctggatttatgacaataaatcctcaaagg
tttggacaaaaatatgtgggaaaggttgcaaatcctcaggatatacttatattctctaaa
tcttcaaatagaggccgcagtgcagtcaaaattgaagagtctgaaaggcttcgaccagaa
gagttgaatcagcagaatatagaagctttagttgctgagagtaatttgaaaatggagata
cttcctgtcaatgatctggatgttgcattgcacagttttgtcaacaaggatgacaagatg
gctttctattcttgtgtgcaatacaacctcaaggaaactcgtaataaaattactcgggat
tcagatacactgaaatttgaagaggaggatataattctcaaagttggggagtgcttagag
gaacgtgtcaaagaaagagctgtacagaataaagatgaccaaccattctcatttagtggg
caatcctcagagatcagaagtaaaagtattagaggcattgaaagtgcagtttccttcagt
gatgatgaggacacaactcctttttctgcctcaaagtctactgccaataagggcaagaaa
gagttatctcaatcttttaggtcctctcacgatgcttctgaagtgggcaaaacttcaaga
ggaaggggccgggggagaggtagaggcagaggcagggcttctagcaatttaaagcagaca
acacttgatatgggatttcgtcattcacaaatatcctcatcagttcgaagcattgcagag
gatgaggagaacgtggactctgattcaagtgatgaaaaagctgagaatgaaataaatgat
gtcgatgatagcttggatgatgaaactcttcaaggcaaaggccgcaaaagggctgcccca
cggggaaagggtagaggtagtacatcctcagctaagagaggaaagaagtcagataatgct
ccttcaattcaaaggatgcttatgaatttagatgatgaagatgatgatgatgaagtgcca
aagaaatcaaacaaacctccacctcgtgtaacaaggaactacggtgctctacggaggtga
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