Ipomoea triloba (trilobed morning glory): 116019131
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Entry
116019131 CDS
T07384
Name
(RefSeq) coatomer subunit alpha-1-like
KO
K05236
coatomer subunit alpha
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
itr04131
]
116019131
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
itr04147
]
116019131
Membrane trafficking [BR:
itr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
116019131
Exosome [BR:
itr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
116019131
Exosomal proteins of bladder cancer cells
116019131
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
TPR_COPA_B
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_SPT8
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
116019131
NCBI-ProteinID:
XP_031115111
LinkDB
All DBs
Position
1:complement(37360841..37365780)
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AA seq
1216 aa
AA seq
DB search
MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH
KSQPLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILR
LSQMNTDFFGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKIWRMNDTKAWE
VDTLRGHMNNVSCVLFHSRQDIIVSNSEDKSIRVWDATKRTGLQTFRREHDRFWILSAHP
EMNLLAAGHDSGMIVFKLERERPAFSVSSDSLFYVKDRFLRVYEYSTQKDTQLIPIRRPG
SNSLNQSPRSLSYSPTENAVLICSDVDGGSYELYIVPKDSFGRGDTVQDAKRGTGGSAVF
IARNRFAVLEKSTNNVLVKNLKNEIVKKSALPIATDAIFYAGTGNLLCRTEDRVVIFDLQ
QRIVLGDLQTSFIRYVVWSHDMESVALLSKHSIVIADKKLVHRCTLHETIRVKSGAWDDN
GVFIYTTLTHIKYCLPNGDSGIIKTLDIPVYITKIYGNTIFCLDRDGKNRPIIIDSTEYI
FKLSLLRKRYDQVMNMIRNSELCGQAMIAYLQQKGFPEVALHFVKDERTRFGLALESGNI
EIALESAKKIDEKDHWYRLGVEALRQGNAGIVEYAYQKTKNFERLSFLYLITGNLEKLSK
MMKIAEVKNEVMGQFHNALYLGDIRERVKILENAGHLPLAYITASVHGLSDIAERLAEEL
GDNLPSLPTEKKASLLLPPSPISGGGDWPLLMVTKGIFEGTLNIPNGGAQEEYEEAADAD
WGEELDIGEVENLQNGDISMVLEDDEGQEEIEGGWDLEDLDLPVEAETPKTVTNARSSVF
IAPTPGMPVSQIWVQKSSLAAEHAAAGNFDTAMRLLNRQLGIRNFSPLKQLFIDLHLGSH
SYLLAFSSAPVISVAVERGWSESASPNVRGPPALVFNFSHLEEKLKAGYRLTTQGKFSEA
LRTFLNVLHTIPLVVVESRREVDEVKELVIIVKEYVLGLQMELKRKEMKDNPTRQQELAA
YFTHCNLQLPHLRLALQNAMTVCFKATNMITAANFARRLLETNPTVENQAKVARQVLQAA
EKNMRDSTQLNYDFRNPFVICGATYVPIYRGQKDVSCPYCYTHFVPSQEGQLCTVCDLAV
IGADASGILCSPAQAR
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgttgacgaaattcgagacgaagagtaaccgagtgaaggggctgagcttccacagcaag
cggccatggatcttagccagtctccacagcggcgtgatccagctctgggactaccggatg
ggcaccctcattgatcggttcgacgagcatgatggccccgttcgcggcgttcactttcac
aaatcgcagcctctcttcgtttccggaggtgatgattataaaattaaggtatggaattac
aagctgcataggtgtctgtttaccctccttggacatcttgattacattcgaactgttcaa
tttcatcatgagtacccatggattgttagtgcaagtgatgatcagacaatcaggatatgg
aattggcagtctcggacatgtatttctgtcttgaccggtcacaaccattatgtgatgtgt
gcctcatttcatcccaaagaggacttggttgtctcagcatcattggatcagactgttcgg
gtctgggatattggtgccctgaggaaaaaaacagtttcccctgctgatgacatcctgcgg
ttgagtcaaatgaacacggacttctttggtggggttgatgctgtggtgaagtatgtctta
gagggccatgatagaggtgttaattgggcttcttttcatcctacactccccctaattgtt
tctggtgcagatgatcgccaagtcaagatttggagaatgaatgacacaaaagcttgggag
gtggacacattgagaggccacatgaacaatgtctcctgtgttttgtttcactcaaggcaa
gatattattgtttcaaattcagaggataagagcatacgtgtatgggatgcaacaaaaagg
actggccttcagactttccgtagggaacatgacaggttctggatcctttcagctcatcct
gagatgaaccttttagcagctgggcatgatagtggaatgatagtgttcaagttagagaga
gaacgacctgctttttcagtgagttctgattctcttttttatgtgaaggatcgattcctt
cgagtttatgaatattcaactcagaaagacacgcagttgataccaattcggaggcctggt
tcaaacagcttgaatcaaagtccacgctccctttcatacagtcctactgagaatgctgtc
ttgatatgctctgatgtggatgggggttcttatgaactatatattgtgcctaaagacagt
tttgggaggggtgacactgtgcaagatgcaaaaagaggaactggaggatctgctgtgttc
attgctcgaaataggtttgcagtgcttgagaagagcaccaataatgttctagtcaagaat
ctcaaaaacgaaattgtcaagaaaagtgctcttccaattgctacggatgcaatattttac
gctgggacaggaaacttattatgtcggactgaggatagggttgttatttttgatctccag
cagaggattgttcttggagaccttcaaacatcttttattaggtatgttgtttggtcacat
gacatggagagtgttgctttgctgagcaagcattctattgttatagctgataagaagctg
gtgcaccgctgcacacttcatgagacgattcgcgttaagagtggagcctgggatgacaat
ggggttttcatatataccacactaacccacatcaagtattgccttcccaatggagatagt
ggaattatcaagaccttggatatccctgtctatataacaaaaatatacggaaacacaatc
ttttgcttggatcgagatgggaagaaccgtccgattatcatcgattcaactgagtatatc
ttcaagctatcactgctgaggaagagatatgatcaggtaatgaacatgataaggaactca
gaactctgtggccaagcaatgattgcgtatttgcagcagaagggctttcctgaagttgct
cttcattttgtcaaagatgaacggactcgttttggcttagcacttgagagtgggaacatt
gagattgcacttgaatctgcgaaaaagatagatgagaaagatcactggtataggctggga
gtggaggcccttcggcaaggtaatgctggcatagttgaatatgcataccagaagacaaag
aactttgagaggctctcttttctttatctgataacggggaacctggagaagctatccaag
atgatgaaaattgctgaggtgaaaaatgaagttatgggtcagtttcacaatgctttgtac
cttggtgacattcgtgagcgtgtcaagatattggagaatgctggtcatctgccccttgcc
tacatcacagcctctgttcatgggctcagtgatattgctgagcgtcttgctgaagaactt
ggtgataatcttccatcattgccaacagaaaagaaggcttctcttctgctacctccaagt
cctatatctggtggtggagattggcctttactgatggtcactaaaggcatattcgaaggt
actttaaatattcccaatggaggtgcacaagaagaatatgaggaagctgctgatgctgat
tggggtgaggagttggatattggtgaggttgaaaatctgcagaatggtgatattagtatg
gttctggaggatgacgaaggtcaagaagaaattgagggaggatgggatttggaggatctg
gatctgcccgttgaagctgagactccaaagactgttactaatgcacgctcttctgttttt
attgctccaacccctggcatgccagtgagccagatttgggtgcaaaaatcatctcttgcg
gctgagcatgctgctgctgggaactttgacactgcaatgcggttgctgaaccggcaatta
gggattaggaatttctctcctctaaagcaattgttcatcgatcttcatttaggcagccac
agctacttgcttgccttttcatcagccccagtgatttcagtggctgttgagagaggatgg
agtgaatcagcaagtcctaacgtgcggggtccacctgcccttgtgttcaatttttctcat
ctggaagagaaacttaaagctggttataggttgacaactcaagggaaattctctgaggct
ctgcgaacttttctgaacgtccttcacacaattcccctggtggttgttgagtcacgaaga
gaggtggatgaagtcaaagaactggttatcattgtgaaggagtatgttttgggtctgcaa
atggagcttaaaaggaaggaaatgaaggacaaccctactcgccagcaggagttggcagcg
tatttcacccattgtaatctccagcttccacatttgagacttgcattacagaatgccatg
accgtatgcttcaaggcaactaacatgattacagcagccaactttgctaggcgactattg
gagaccaacccaactgttgaaaaccaggccaaggtggcccggcaagtgctgcaggcagct
gaaaaaaacatgcgagattcaacacaactgaattatgacttccgaaatccttttgtcatc
tgcggtgccacctatgtccccatctaccgtggacagaaggacgtcagttgcccttactgc
tacacccatttcgttccatcccaagaagggcagctttgtactgtttgtgatcttgcagtg
atcggagcagatgcatctggtatactttgttctcccgcccaggccaggtga
DBGET
integrated database retrieval system
