KEGG   Ipomoea triloba (trilobed morning glory): 116019567
Entry
116019567         CDS       T07384                                 
Name
(RefSeq) protein RRC1-like isoform X1
  KO
K12842  U2-associated protein SR140
Organism
itr  Ipomoea triloba (trilobed morning glory)
Pathway
itr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:itr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    116019567
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:itr03041]
    116019567
Spliceosome [BR:itr03041]
 Complex A
  U2 snRNP components
   U2 related factors
    116019567
 Complex B
    116019567
SSDB
Motif
Pfam: Surp RRM_1 CID cwf21 RRM_7 CTK3 SAP
Other DBs
NCBI-GeneID: 116019567
NCBI-ProteinID: XP_031115697
LinkDB
Position
5:27212458..27221775
AA seq 970 aa
MSSRKKTPFQKHREEEEAKKKRAEDETARLYQEFVESFQVDDVPGSKAFVRGGVINPNEK
LKNDSEGGNSNDEGSGLKKGSRYVPSFIPPPMATKSRDYEKKKEEKPREKEKGKSRNIDN
FMEELKHEQEMRERRNQEREHWRDRHTDNSTPSSRFDELPDDFDPSGRPGSFDDGDPQTT
NLYVGNLSPQVDENFLLRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMNRADAQAA
KDEMQGVVVYEYELKIGWGKSVSLPSQALPAPPPGHMAIRSKEGATVILSGPSGPPVTSV
PSQNSELVLTPNVPDITVVPPDDDHLRHIIDTMALYVLDGGCAFEQAIMERGRGNPLFSF
LFELGSKEHTYYVWRLYSFAQGDTLQRWRTEPFIMITGSGRWIPPSLPSAKGIDHEKEGG
STYAAGRSRRVEVERTLTDAQRDEFEDMLRALTLERSQIKDAMGFALDNADAAGEVVEVL
TESLTLKETQPPTKIARLMLVSDILHNSSAPVKNASAYRTKFEATLPDVIESFNDLYRSI
TGRMTAEALKERVLKVLQVWTDWFLFSDAYVNGLRATFLRSGNSGVIPFHSLCGDAPELE
QKGSSMDTVDGVKVNPDAALAIGKGAAMKELLNLPLPELERRCRHNGLSLVGGREMMVAR
LLYLEEAEKQRGYELDDELKHGSHSSSGKHSNSRKETSELDQLGLSGWNSYVDESIQQKR
NESLQSPPRTQTTQPESIALSNEVKNDPILPSSKWAREDDESDGEEKKSNRDLGLTYSSS
GSENAGDGTGKTDEAELTTEASNISHLETGINEEQRQKLRRLEVALIEYRESLEERGIKN
TEEIEKKVEIHRRRLQSEYGLLNFNEDASRKSIRSSLERRERRNEPQEASRKRHRSRSRS
ESPPRKSSSRDRDKESDLNRDRERRRERERVHDVESDKQRDRKSGSRERDDHDRDRARER
ERERERRRVR
NT seq 2913 nt   +upstreamnt  +downstreamnt
atgagttcacggaagaagacacctttccagaaacaccgcgaagaggaagaggctaagaaa
aagagagctgaggatgaaacagctcgtctatatcaagagtttgtggagtcattccaagtt
gatgatgtacctggttcaaaggcatttgttagaggaggggtcatcaatcccaatgagaag
ttgaagaatgattctgaaggtggaaattccaacgatgagggttctggtttaaagaagggg
agtaggtatgtaccatctttcataccacctcctatggcaactaagagtagagattatgaa
aagaagaaggaggagaagcccagggaaaaagaaaaaggaaaatcaaggaatattgataat
tttatggaggaattgaaacatgaacaagaaatgagggaaaggcgaaatcaagagcgtgaa
cattggcgtgaccgacatactgataattctactccatctagtcgatttgatgagcttcca
gatgattttgatcccagtggaaggcctggatcatttgatgatggggacccgcaaaccaca
aatctttatgttggaaatctatcacctcaggttgatgaaaatttccttttgcgcactttt
gggagatttggacctattgcaagtgtcaaaataatgtggcccaggacagaagaggaaaga
aggcggcaaaggaattgtgggtttgtagctttcatgaatagagctgatgctcaagctgca
aaagatgagatgcagggagtggttgtatatgagtatgagttgaagattgggtggggtaaa
tctgtctctctcccatcacaagctctacctgctcctcccccgggacatatggccatcagg
agtaaggagggtgccactgttattttgtctggtccatcaggtcctccagtcacttctgta
ccaagtcagaattctgagctggttttaactccaaatgtacctgatattactgttgttcca
cctgatgatgatcacctgcgccatatcattgatacaatggctctctatgttcttgatgga
ggttgtgcctttgagcaagccataatggagcgaggtcgtggaaatcccctcttcagcttc
ttgttcgagcttggctccaaggagcatacttactatgtttggaggctttattcatttgct
cagggagatactcttcaacgatggcgcactgaacctttcattatgataactggtagtggc
aggtggataccaccctctctgccatcagcaaaagggattgaccatgagaaggaaggtgga
agcacatatgctgctggaagaagccggcgtgtggaggtggaacgtacactgacagatgca
cagagagatgagtttgaggatatgcttcgtgcattgacactagaaagaagccagataaaa
gatgcaatgggttttgctttagataacgctgatgctgccggagaggtggtcgaggtttta
acggagtctctgacacttaaagaaactcaaccaccaactaaaattgcacggttaatgctg
gtctctgacattcttcataatagtagtgctcctgtgaaaaatgcatctgcttaccgcacc
aaatttgaagctactttaccagatgtaattgaaagcttcaatgacttgtatcgcagtatt
acaggtcgaatgacggctgaggcccttaaggagagggttctgaaagttcttcaagtatgg
actgactggtttttgttttcggatgcttatgtcaatggcttgcgggcaacctttcttcga
tcaggcaattctggtgtaatcccctttcattctctatgcggtgatgctcctgagttagaa
cagaaaggcagttccatggacacagttgatggtgttaaagttaatccggatgctgcattg
gctattgggaaaggagctgccatgaaggagcttttgaatctccctcttccagagctagaa
aggcggtgcaggcataatggtttgtctcttgtaggtggtagagagatgatggttgctcga
ttactttatcttgaagaggcagaaaaacagagaggctatgaactagatgatgaattgaaa
catgggagccactcaagttctggaaaacattctaatagccggaaagagactagtgaatta
gatcaattgggcttgtcaggttggaatagttatgtggatgaaagcatacaacaaaaacgc
aacgaatctctgcagtcacccccgagaactcaaactacacagcctgaatcaattgctttg
tcaaatgaggtaaaaaatgatcctattttgccatcctcaaaatgggctagagaggatgat
gaaagtgatggcgaagagaaaaagagcaacagggatttggggttgacatactcatcctct
gggagtgagaatgctggtgatggtaccggtaagactgatgaggcagagcttacaactgaa
gcaagcaacatatcacatcttgaaactggaataaatgaagaacagagacaaaagctgagg
cgtcttgaagttgctttaattgaatatcgagaatctcttgaagagcgagggataaaaaat
actgaagaaattgagaagaaagttgaaatccatagacgacgtctacaatctgaatatggt
ttactgaacttcaacgaagacgcttcaaggaaatccatcaggtcatccttggagagaaga
gagagaagaaatgagcctcaggaagcatcaaggaagcgtcacaggagtcgaagcagaagc
gagagcccaccgcggaaatcttccagcagagaccgggataaggaaagtgatttgaacaga
gaccgagaacggcgccgcgagagggaaagagttcatgatgtagaaagcgataagcaaagg
gacaggaaaagcggaagcagggagagggacgaccacgatagagacagggccagggagaga
gaacgagaacgagaaaggagaagagtaagataa

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