Ipomoea triloba (trilobed morning glory): 116019573
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Entry
116019573 CDS
T07384
Name
(RefSeq) cell division cycle 20.1, cofactor of APC complex-like
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116019573
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
itr04121
]
116019573
03036 Chromosome and associated proteins [BR:
itr03036
]
116019573
Ubiquitin system [BR:
itr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
116019573
Chromosome and associated proteins [BR:
itr03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
116019573
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WDR55
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_RIG_2nd
EIF3I
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_EIPR1
eIF2A
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_SCAP
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_RIG_1st
Beta-prop_IFT122_1st
RMC1_N
Ge1_WD40
CFAP43_N
DPPIV_N
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
116019573
NCBI-ProteinID:
XP_031115704
LinkDB
All DBs
Position
5:complement(26816327..26819839)
Genome browser
AA seq
451 aa
AA seq
DB search
MDAGLRNSASSNKTQSRFPLQEEYLQRKTSRENLDRFIPNRSAMDFDYAHYMVTKGKENP
DTLSPSREAYRKQLAEALNMNRTRILAFKNKPPTPVEGITNEFSSAAYQAKPMKPKRHIP
QTSERTLDAPDIVDDYYLNLLDWGSSNVLSIALGSTVYLWDASDGITSELVTIDDENGPV
TSVKWAPDGKHIAIGLNNSDVQLWDTTANRLLRTLRGGHQSRVGALDWNNHILTTGGMDG
LINNNDVRVRAPIVETYRGHHQEVCGLKWSASGQQLASGGNDNLLHIWDRSTASSNSSTQ
WLHRLEDHTAAVKALAWCPFQGNLLASGGGGGDRCIKFWNTHTGACVNSVDTGSQVCALL
WSKNERELLSSHGFTQNQLTLWKYPSMVKMAELTGHTSRVLFMAQSPDGCTVASAAGDET
LRFWNVFGTPEVAKQAPKSNPEPFAHINRIR
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaggattaaggaactctgcttcttcaaacaagactcaatcccgttttcctctt
caggaggagtatcttcagagaaaaacttcccgcgaaaatttggataggtttattccaaat
agatcagcaatggatttcgactatgcacattatatggtgacgaaaggtaaggaaaatcca
gacaccctctcaccatccagagaggcatatagaaagcagctcgcggaggccttgaacatg
aacaggacacggatccttgcatttaagaacaaaccacccacccctgtggagggcatcaca
aatgagttttcttctgctgcttaccaggccaaaccaatgaaacccaagcgccacattcct
cagacctctgagaggactttggatgctccagatattgtggatgattattacttgaatcta
ttagattggggcagcagcaatgttctttctatagctttgggtagtactgtttacctgtgg
gatgcatctgatggcatcacttccgaactggtcacaattgatgatgaaaatggtcctgtt
acaagtgttaaatgggctccagatgggaagcatattgctattggcttgaacaactctgac
gtgcagctttgggataccacagctaaccgattgttgagaactttgagaggcggccaccaa
tcacgagtaggtgcccttgactggaacaaccatatactgaccacaggcggaatggatggt
cttattaataacaatgatgtccgagtgagagcacctatcgtagaaacatatagagggcat
catcaagaagtctgtggcctgaaatggtctgcctcaggccagcagttggctagtggagga
aatgataatctcctccacatatgggacagatcaactgcttcttccaactcctcgacgcag
tggcttcacaggcttgaggatcacacagctgctgttaaggcccttgcttggtgtccattt
cagggtaacttgctggcctctggtggaggtggaggcgataggtgcataaagttctggaat
acccatactggtgcttgcgtgaactcagttgatacagggtcacaggtctgtgcactgctt
tggagcaagaatgagcgtgaattgctaagctctcatgggtttactcagaatcagcttact
ctctggaaatacccatcaatggttaagatggcagagcttactggacatacatcccgagtt
cttttcatggctcagagtccggatggttgcacagtggcttctgcagcaggagatgaaaca
ctgagattctggaatgttttcggaaccccggaagtggcaaaacaggctccaaagtcaaat
cctgagccattcgctcacatcaaccgaattcgctga
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