Ipomoea triloba (trilobed morning glory): 116019706
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Entry
116019706 CDS
T07384
Name
(RefSeq) DNA mismatch repair protein MLH1
KO
K08734
DNA mismatch repair protein MLH1
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03430
Mismatch repair
itr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
116019706
03460 Fanconi anemia pathway
116019706
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
itr03400
]
116019706
DNA repair and recombination proteins [BR:
itr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
116019706
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
116019706
NCBI-ProteinID:
XP_031115863
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Position
5:620292..628326
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AA seq
740 aa
AA seq
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MEAQPELPSTEVDTEMEVEDDQIPPSNSKDPPPILRLDQSVVNRIAAGEVIQRPVSAVKE
LVENSLDAGSTSISVVVKDGGLKLIQVSDDGHGIRKEDMPILCERHTTSKLSKFEDLQSI
KSMGFRGEALASMTYVGHVTVTTITTGQLHGYRATYRDGVMEDEPKACAAVKGTQIMIEN
LFYNMAARRKTLQNSADDYPKIVDLISRFAIHHTDVSFSCRKHGAARADVHSVATPSRLD
AIRSVYGVSVARNLVKIDVSDNDPSNSVFEMDGFISNANYIAKKITMVLFINDRLVDCGA
LKRAIEIVYGATLPKASKPFVYMSITLPPEHVDVNVHPTKREVSLLNQEVIIEKIQSVVE
LKLRSSNESRIFQEQTMDPSSSSPLATNQDSQKDPSKSVIKSQKTPVHKMIRTDSLDPAG
RLHAYLQIKPSNNTERSSCLTSVRSSIRQRRNPKETADLTSIQELINEIDSTCHSGLLDT
VRGCTYIGMADDVFALLQHNTHLYLANVINLSKELMYQQVLRRFAHFNAIQLSEPAPLSE
LLMLALKEEDVAADDNENDDLKEKIADMNTSLLKQKAEMLEEYFSIYIDSNGNLSRLPVI
LDQYTPDMDRVPEFVLCLGNDIDWEDEKNCFQSISAALANFYAMHTPLLPNPSGDGSQFY
KKGTSSSSINGQGNDTTEDEYENDLLSEAENAWAQREWSIQHVLFPSLRLFFKPPNAMAT
NGTFVQVASLEKLYRIFERC
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggaagctcaaccggagctaccttctactgaagtagacacggaaatggaagtagaggac
gaccaaattccaccttcgaattccaaggacccgcctccgattctccgcctcgaccagtct
gtggtgaacagaatcgccgctggagaggtcatccagcgaccggtctccgccgtgaaagag
cttgtggagaacagcctcgacgctggctccacctcaatctccgtcgttgtcaaagacggc
ggcctcaaactcatccaagtctccgatgatggccacggcattcgcaaagaggatatgcca
atattatgtgagagacatacaacatccaagttgagtaagtttgaggatttgcaatcgatc
aaatcgatggggttcagaggagaggcattggctagcatgacctatgtaggtcatgtaaca
gttaccaccattaccacgggtcagttgcatggttacagggcaacatatagagatggtgta
atggaagatgaaccaaaagcatgtgcagctgtaaagggtactcaaataatgattgaaaac
ttattttataatatggctgctcggaggaaaacgcttcagaactctgctgatgactatcca
aaaattgtggacctcattagtaggtttgccattcatcatacagatgtgagcttctcttgc
agaaagcacggagctgcgagagctgatgttcactcagttgcaacaccctcaagacttgac
gcaatacgatcagtttatggtgtgtcagttgcacgaaatctggtcaaaattgatgtttct
gataatgatccatcaaattcagtttttgagatggatggattcatttccaatgctaattac
attgcaaagaagattaccatggtgcttttcatcaatgacagacttgtagattgtggtgct
ctcaagagggcaattgaaatagtttatggtgcaacattgcctaaagcatcaaaaccattt
gtgtatatgtcaatcactttaccccctgagcatgttgatgtgaatgtacaccccacaaag
agagaggttagccttttgaaccaagaggttattattgagaagatacaatctgtggtggaa
ttgaagctgagaagttccaatgagtcaaggatattccaagagcagacaatggatccttct
tcatctagtcctttggctacgaaccaagattcacaaaaagatccctccaaatctgtgata
aaatcacaaaaaactccagttcataaaatgataaggacagattcactggatcctgccgga
aggttgcatgcgtacttgcaaatcaagccttctaataatacagaaagaagttcttgcttg
acttctgtgaggtcttctatcagacaaaggagaaaccctaaggagactgctgatcttact
agcattcaagagctcattaatgagattgattctacctgtcattctggtttgctggacact
gtaaggggctgcacatacattgggatggcggatgatgtttttgctctgcttcaacacaat
actcacctttatcttgcaaatgtaattaacttgagcaaagagctcatgtaccagcaagtt
ttgcggcggtttgcacattttaatgccatccaattaagtgagccagccccattatcagag
ttgctaatgcttgctctgaaagaagaagatgtggctgcagatgacaatgaaaatgatgac
ctgaaagaaaagattgctgatatgaatacaagtctgctcaagcaaaaggctgagatgctt
gaggagtattttagcatctatattgattcaaatggtaacctgtccagacttcctgtcata
ctggatcagtacacgcctgacatggaccgtgtcccagagtttgtgctttgtctgggcaat
gatattgactgggaggatgaaaagaattgttttcaatcaatttctgctgctcttgccaac
ttctatgccatgcatactcctttgctacccaatccctcaggcgatggctcgcaattctac
aagaaggggacaagttcaagcagtattaatgggcaaggaaatgacacaacggaggatgaa
tatgaaaatgatttactatcagaggctgagaatgcatgggcacagcgtgaatggtcaatt
cagcatgttttgtttccttctctcagactcttcttcaagcccccaaatgcaatggctaca
aatggaacttttgttcaggttgcttcactggagaagctttacaggatttttgaaagatgt
taa
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