Ipomoea triloba (trilobed morning glory): 116019739
Help
Entry
116019739 CDS
T07384
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
KO
K03093
RNA polymerase sigma-I factor
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
itr03021
]
116019739
Transcription machinery [BR:
itr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
116019739
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
GerE
Motif
Other DBs
NCBI-GeneID:
116019739
NCBI-ProteinID:
XP_031115914
LinkDB
All DBs
Position
5:26260844..26264373
Genome browser
AA seq
517 aa
AA seq
DB search
MGVVTVSSSAARSLRGFNNRFSARLCPLKGPFILSFKTDKTKNAALVSPKEAESLLIQSS
KEDEKRLGKPSKLSAGRVCGVVSTDEASPSTIELDYNETAAKLEKLYKSSPETAGSDAEP
GDRTVKRGRRRRKRIGEANEEAEKEIIIRNPKKKAKRLSLDKRITLRKKKEGELVASISQ
KREHREATNDEKIDMLVREYSIGTNLVTLDWKKMKIPPVLSSSEHSWLFKLMQPMKAIFQ
VKENLQNDLGREPTDVEIAEATNMDVVQLRKTLEVGQAARNKLIKHNLRLVLFVVNKYFQ
DFASSPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIIRSMTLSSFTKVSF
GLESVRAEIQKARMELLVKLQRMPTENEITERVGISQERYHEVMKASKPVFSLNAKHKTT
QEELIDGITDVDDVEGDKRKHPALLRLALDDVLDSLKPKESLVMRQRYGLDGKGDRTLGE
IAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYIF
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgactgtttccagctctgctgcgcgtagtctcagaggattcaacaacaga
ttttctgctcgtttatgtccgcttaaaggaccgttcatattatcattcaaaaccgacaag
accaaaaatgcagccttagtttctccgaaagaagccgaatctttacttatacagtcttca
aaagaggatgaaaagaggcttggaaaaccgtcaaagctttctgcaggtcgagtgtgtggc
gttgtctccaccgacgaagcctccccgagtaccatagaattggactacaatgaaaccgct
gcgaaactggagaaactgtacaagtctagtccagaaactgcgggctctgatgcagaaccc
ggagatcgtactgtgaagagagggcgacgaaggagaaagaggattggagaagccaatgaa
gaagcggagaaagaaattattataaggaacccgaagaagaaggctaagcgattgagtctt
gataagaggattacgctgagaaagaaaaaggaaggcgaattggttgcttcgatatcccag
aaacgagagcacagggaggcaactaacgatgaaaagatcgacatgcttgttagggaatac
tctatcggtacaaatttagtgaccttagactggaagaagatgaaaattccacccgtcctt
tcatcgtctgagcattcgtggctctttaaactgatgcagcctatgaaggcaatatttcaa
gttaaggaaaatctacaaaacgatcttggacgagaaccaactgatgtcgaaatagctgaa
gcaacaaatatggatgttgttcagctaaggaaaacattagaagtcgggcaagctgcaaga
aacaaattgatcaagcacaatctgcgccttgttctgtttgtcgtcaacaaatattttcaa
gactttgctagtagcccgaggttccaagacctgtgccaagcaggcgtgaaggggcttata
acagccattgatcgattcgaacccaaaaggaagttccgcctctcaacatatggcctgttt
tggatcagacacgcgattattcgctccatgactctttcgagcttcactaaggtctccttt
ggactcgaatcggtgagagcagaaattcagaaggcgagaatggagctgctggtgaagctg
cagaggatgccaacagagaatgagatcacagagagagttggaatctcccaggagagatat
cacgaagttatgaaagcttcaaagcccgtcttctccctcaatgcaaagcacaagacaaca
caggaagagctcatcgacggcatcaccgatgtggacgacgtcgaaggcgacaagcgcaag
catcccgctcttctcagactcgccctcgatgatgtgcttgattctctgaagccgaaagag
agtctggtgatgagacagagatacggtcttgatggcaagggcgacagaacgctgggagag
attgctggaaatttaaacatttcgagagagatggttaggaagcatgaagtgaaggctctg
atgaagcttaagcatcctgctcgagtggattaccttcgcagatacattttctaa
DBGET
integrated database retrieval system
