Ipomoea triloba (trilobed morning glory): 116019940
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Entry
116019940 CDS
T07384
Name
(RefSeq) vacuolar protein sorting-associated protein 35A-like
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116019940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
itr04131
]
116019940
Membrane trafficking [BR:
itr04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
116019940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
116019940
NCBI-ProteinID:
XP_031116198
LinkDB
All DBs
Position
5:29249175..29256792
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AA seq
790 aa
AA seq
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MITGGVEDEEKWLAAGITGLQQNAFYMHRALDSNNLKDALKYSAQMLSELRTSKLSPHKY
YELYMRAFDELRKLEIFFREETTRGCSIVELYELVQHAGNILPRLYLLCTVGSVYIKSKE
APAKDILKDLVEMCRGIQHPLRGLFLRSYLSQVSRDKLPDLGSEYEGDADTVMDAVEFVL
QNFTEMNKLWVRMQHQGPARDKEKREKERSELRDLVGKNLHVLGQIEGVDLDMYKEIVLP
RVLEQVVNCKDELAQCYLMDCIIQVFPDEYHLQTLETLLGACPQLQPLVDIKTVLSGLME
RLSNYAASSAEVLPEFFRVEAFAKLNNAIGKVIEAQDDMPIAAVVTLYASLLTFTLHVHP
DRLDYVDQILGACEKKLSGKGKLKDTKATKQIVALLSAPLEKYKDIDTALKLSNYPCVME
YLDDATNKEMANIIVQNIMKNKTCISTAEKVEALFGLMKGLIRDLDETLHDELDEEDFQE
EQNSVARLIQMLHNDDPEKMLEIICTVKKHILTGGPKRIPFTVPPLVFNALKLVRQLQSQ
DDNGADEEVSATPKKIFQMLNQTIEVLSNVPAAELALRLYLQCAEAANDCDLEPVAYEFF
TQAYILYEEEISDSRAQVTAIHLIIGTLQRMHVFGVENRDALTHKATGYSAKLLKKPDQC
RAVYACSHLFWVEDQDNIKDGERVLLCLKRALRIANAAQQMSNATRGSSGSVILFIEILN
KYLYFFEKGVSEITVASIQSLIELITTEMHSDNTTSDPAADAFFASTLRYIQFQKDKGGA
VGEKYEAIKS
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgatcaccggcggggtagaagacgaagagaaatggctcgccgccgggattacgggcctt
caacagaacgccttctacatgcatcgcgctctcgattccaacaatctgaaggatgcattg
aagtattcggctcagatgctgtcggagcttcgaacttcgaaactctcgccgcacaaatac
tacgaactgtatatgagagcttttgatgaattgcggaagctggagattttcttcagggag
gaaacgacgcgcgggtgttccattgtcgagttgtatgagcttgtccagcatgctggaaac
attttgcctagattgtatttactttgcacagttgggtccgtttacatcaaatcaaaggaa
gctcctgccaaagacattcttaaagatcttgttgaaatgtgccgtggtatacaacatcca
ttacgtggactcttcctaaggagttacctttctcaagtcagtagggataaattgcctgat
cttggatccgagtatgaaggggatgcagacactgtcatggatgctgtagagtttgtgctt
caaaatttcacagaaatgaacaaactttgggttcgcatgcaacatcagggtccagctagg
gataaggagaagcgagaaaaggaaagaagtgagcttcgtgatcttgttggcaagaaccta
catgttcttggtcagattgagggtgttgaccttgacatgtataaagaaattgtgcttcct
agagtcttggagcaggttgtcaactgtaaagatgaacttgcccaatgctatttgatggat
tgcataattcaagtcttccccgatgagtatcacttacaaactcttgaaacattattggga
gcttgcccccagcttcagccgttggtcgacattaagacagtgctttctggcctgatggaa
aggctctcaaattatgctgcttctagtgcagaagtcttacctgagtttttccgagtggaa
gcttttgcaaaactcaacaatgccattggcaaggtgatagaggcacaagatgacatgcct
attgctgcagttgtgactttatatgcgtctcttttgacattcactcttcatgtccaccct
gatcgacttgactatgtggatcaaatactgggtgcctgtgagaagaaactttcaggaaaa
gggaagcttaaggataccaaagcaacaaaacagattgttgcccttctcagtgctccattg
gaaaagtacaaggatatagatactgcgctaaagctttctaattatccttgtgttatggag
taccttgatgatgcaacaaacaaagagatggctaatatcatagttcaaaatattatgaaa
aacaagacttgcatttcaactgctgaaaaggttgaagcactttttggattaatgaaaggg
cttattagagatttagacgagactcttcatgatgagcttgacgaggaagattttcaagag
gagcaaaattctgttgcaagacttattcagatgctccacaatgatgatccagaaaaaatg
ttagagatcatttgcactgtgaagaagcatattttgactggaggaccaaagagaattccc
ttcactgtccctccccttgtttttaatgcactgaagttggttcggcaattgcaaagtcaa
gatgataatggtgctgacgaggaggtgtctgctacaccaaagaaaatatttcagatgtta
aatcagacaattgaagtcctgtcaaatgttcctgcggctgaactagcactgcggttgtat
ttgcagtgtgctgaggctgccaatgactgtgatctagaacctgtggcctatgaatttttt
acccaagcgtatatattatatgaagaagaaatttcggactctagagctcaggtgactgct
atacacttaataatagggactcttcagagaatgcatgtgtttggtgttgagaacagggat
gcattaacgcataaggccactgggtattctgcaaagcttttgaagaaacctgatcagtgt
agagctgtctatgcttgttcgcatctcttctgggtcgaagatcaggataacatcaaggat
ggagagagggtcttgctttgcttgaagcgtgccttacggattgcaaatgctgctcaacaa
atgtccaatgcaacccgaggcagcagtggatcagtcatacttttcatagaaattctgaac
aagtatctgtatttctttgagaagggggtttcagagattactgtggcttcaatccagagc
ctgattgaactaattacaaccgaaatgcatagtgacaatacaacatcagatccggctgca
gatgctttctttgcaagcacactgcgatatatccagttccagaaggataaaggcggagct
gttggtgagaaatatgaggcaatcaagtcgtaa
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