Ipomoea triloba (trilobed morning glory): 116019952
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Entry
116019952 CDS
T07384
Name
(RefSeq) autophagy-related protein 13a-like isoform X1
KO
K08331
autophagy-related protein 13
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
116019952
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
itr04131
]
116019952
03029 Mitochondrial biogenesis [BR:
itr03029
]
116019952
Membrane trafficking [BR:
itr04131
]
Autophagy
Autophagosome formation proteins
ULK complex
116019952
Atg1 complex
116019952
Mitochondrial biogenesis [BR:
itr03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
116019952
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
116019952
NCBI-ProteinID:
XP_031116216
LinkDB
All DBs
Position
5:26801234..26804885
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AA seq
599 aa
AA seq
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MDTQSYPQGELGRFEQIISQFLLKSLHIVLDSRIPSMRPYGRSGELKKSDRWFNLVLGDR
PAALDNLSFWHRNLMEPMIIDIMLVQDKPNSSSEPYLSSTLGGTLSETVIERWVVQYEHV
RALAPQIGDSSYKKSYKKVILLLRSLYSMMRLLPAYKAFQKLSSSQSCDFDINYKVSSFS
APFSRVEEQLMKEYSFVPVEAQQGRFSISLTYRDNLSDFNLETSSSFPPQIITDYASTDP
IRSFPSTTSDKDVHATVFPLRRMHSSPSTPLQHPHSWTSGLHKGPSVSPNQPYVGSPLSY
RSPYELSSSPTDVYGQRISNYRLPTHHRATSSDDYQLSPPFSPSPSPSPPTYLSGGNPMK
SRWRSETAPVSIPHPMIGRSSRYLSPNLSDPNRHSLPPPSPRSTKHDSSSHESPSGVRSL
RKSGESSFGNTIMSQKVSRDTKDDSGRFSGLLSSSGSPRVGFSRSSSRLSFQDDLDDSDF
SCPFIVDDVDTSDSQFSSQNPNVKKDSESSSSQAFLGSRKSQEAAVGALVQMLKNAPPLR
QDSSCHSVKTELAGGIGAVSEFSGSRKTLDALEELKAYKELKELILSKSATRTSSVSKS
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggatacacagagttaccctcagggtgaattgggaaggtttgagcaaattatttcccag
tttcttttgaagagcttgcatatagtattggattcaaggattccttccatgcgaccatat
ggacgcagtggagaactgaaaaagagtgacagatggttcaatttggtgttgggggatcgt
cctgctgctcttgataatttgagtttttggcacaggaatttgatggagccaatgattatt
gatataatgctggtgcaagacaaacctaattcttcatctgagccttatttgagttccaca
ttgggtgggacattatcagaaactgttatagagaggtgggtagtacaatatgagcatgtg
agggctttggcaccacaaattggtgattcgtcttacaagaaatcgtacaaaaaagtaatt
ttactgttgcgctctctttattcaatgatgaggctccttccagcttacaaggccttccaa
aaactatcgtctagtcagagttgtgattttgatattaattacaaagtatcttcatttagt
gctccattctctagggtagaagagcagctgatgaaagagtattcttttgttccagttgaa
gctcaacaaggtcgcttttctatatctctgacatatcgtgataatctctctgatttcaac
ttggagacttcctcgtcttttccgccacagattattacagattatgcaagtacagatcct
attaggtcattcccttccactacatcagataaagatgttcatgctacagtatttccattg
agacggatgcattcatctccttcaacgccactacagcacccgcatagttggacaagtggt
ctccacaaggggccttctgtatctccaaaccaaccttatgtaggttctccactgtcttat
cgctcaccttatgagctgtcatcctcaccaactgatgtttatggccaaaggatttcaaac
tacagattgcctactcaccacagagcaacaagctcagatgattaccagctttcacctccg
ttctctccatctccatccccatccccacctacatacctttcaggtggaaatcctatgaag
tcacgatggcgttcagaaactgccccagttagtatccctcatccaatgattggcagaagt
tctagatacctttctcctaatttgtctgacccaaataggcattcacttccccctccatcc
cccagaagtacaaagcatgactcctcatcacatgaatccccgtctggagtcaggtcatta
aggaaatcaggggagtccagttttggaaatacaattatgagtcagaaggtgtccagagat
acaaaagatgactcaggccggttctcaggtttgctatcttcaagtggttcgccacgtgtt
ggattctctcgaagttcaagtagattatctttccaggatgacttggatgactctgatttt
tcttgcccatttattgttgacgatgttgatacttctgattcccaattcagcagccaaaac
cctaatgtcaagaaggattcagaatcttcttcttcacaagcatttctgggaagcagaaaa
tcacaggaagctgctgtgggcgcccttgttcaaatgctcaagaatgctcctcctttacgt
caagattctagctgccactccgtaaagactgaactggcgggaggaattggcgctgtttcc
gagttctctggttctcggaagactttggatgcattggaggagctcaaagcttacaaagag
ttgaaggaacttattctttccaagagtgcaaccagaaccagctcagtcagcaagagctaa
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