Ipomoea triloba (trilobed morning glory): 116020009
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Entry
116020009 CDS
T07384
Name
(RefSeq) cyclic nucleotide-gated ion channel 4-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
116020009
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
itr04040
]
116020009
Ion channels [BR:
itr04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
116020009
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Motif
Pfam:
cNMP_binding
Ion_trans
IQ_SCN5A_C
Motif
Other DBs
NCBI-GeneID:
116020009
NCBI-ProteinID:
XP_031116300
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Position
5:30195991..30202653
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AA seq
682 aa
AA seq
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MASIHELEPSRSNDEYYETDEEEEDNEDEEAEEEDKFHGCNRSVFGGGGSRRRAGLFCGL
FGKVLDPRATWVREWNRVFLLVCAAGLFVDPLFFYALSISDNCMCLFVDGWFATTATVLR
CMTDALHLCNMWVQFKTDTRRTQVFGGDDATRRQHDNLVTRRAVASRYLKAKKGFLFELF
VILPLPQIVLWVTTPALLEKEKTATVMTVFLIVFLFQYLPKIYHSVGHLRRMQNLSGGYI
FGTVWWGIALNMIAYFVASHAVGACWYLLGIQKAVKCLKEQCRASKGCSLGLLACEDPIY
FGATTAAGDRSARWLWAENHQARTTCLAADNDNYAYGAYEWTVQLFTNENRLEKILLPIF
WGLMTLSTFGNLECTTDWLEVVFIIVVLTSGLLLVTMLIGNIKVFLNATTSKKQAMHLKM
RNLEWWMRKRRLRPELRQRVRNYERQRWAAMRGVDECQMIRNLPEGLRRDIKYHLCLDLV
RQVPLFQHMDSLVLENICDRVKSLIFTKGETITREGDPVKRMLFIVRGHLQSSQHLRDGV
KSCCMLGPGNFSGDELLSWCLRRPFVERLPPSSFTLTTLETTEAFGLDAQDVKYVTQHFR
YTFVKEKVKRSARYYSPGWRTWAAVAIQLAWRRYRHRLTLCSLPFILPRRPPTRCSSIEE
DRLRLYTALLTSAKPNEDEFDF
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcatccatgaactggaaccttcacgcagtaatgatgaatactacgaaactgat
gaagaagaagaagataatgaagacgaagaagcagaagaggaagacaagtttcacggctgc
aataggagcgtattcggcggcggcggatctcgccgccgtgccggattattctgcggcctg
tttggaaaggttttagacccgagggcaacgtgggttcgagaatggaaccgggtgttccta
ctagtatgcgccgccggcctgttcgtcgatcctctgttcttctacgccctctccataagc
gacaactgcatgtgcctcttcgtcgacgggtggttcgccaccaccgccaccgtgctccgc
tgcatgaccgacgccttgcacctctgcaacatgtgggtgcagttcaagacggacacgcgg
cggacgcaggtattcggcggcgacgacgcgacacgacggcaacacgacaacctcgtcacc
cgccgcgccgtcgcgtctcgatatcttaaagccaaaaagggtttcctctttgaactcttc
gtcatccttcctttaccgcagatagtattatgggtgacgacgccggcgttactggagaag
gagaagacggcgacggtgatgacggtgttcttgatcgtcttcctcttccaataccttccg
aagatctatcattccgtcgggcacttacggcggatgcagaatctctccggcggctacata
ttcggcaccgtttggtggggaatcgctctcaacatgatcgcatatttcgtagcctctcat
gctgtaggggcatgttggtatttgctagggatacaaaaggctgttaagtgcttgaaagag
caatgtagggcgagtaagggttgcagcctgggattgctggcttgtgaagaccctatttat
tttggagccaccaccgcggccggcgaccggtctgcgcggtggctgtgggcagagaaccac
caggcaaggacaacttgcctggcggcggacaacgataattatgcttatggagcatatgaa
tggacagttcaacttttcacaaatgaaaatcgtttggagaagatactccttcccatcttc
tggggactcatgactctcagtacttttggtaacttggagtgcaccacagattggctagaa
gtggttttcatcatcgtcgttctcactagtgggcttcttctggtcaccatgttgatcggt
aacatcaaggtgtttttgaatgcgacgacgtcgaagaaacaggcgatgcatttgaagatg
cggaacctggagtggtggatgaggaagaggcggttgaggccggagctccggcagagagtt
aggaactacgagcggcagcgctgggcggcgatgcgcggcgtcgatgagtgccaaatgatc
cgaaatctgccggaaggcctccggagagacatcaaatatcatctctgcttggacttagtt
agacaggtaccattgtttcagcatatggatagtttggtcctggagaacatatgtgatcgt
gtcaaatcccttatatttacaaaaggagaaacgataaccagggagggagacccggtgaag
agaatgctattcatagttcgaggccatctccagagcagccaacacctccgggacggcgtg
aagagctgctgcatgctaggtccgggcaacttcagcggcgacgagctcctctcctggtgt
ctccgccgccccttcgtggagcgcctcccgccctcctccttcacgctcaccacgctcgag
accaccgaggctttcggcctcgacgcgcaggacgtcaagtacgtcacgcagcacttccgc
tacacgttcgtcaaggagaaggtgaagcggagcgcgcggtattactcgcccggatggagg
acctgggccgccgtcgcgattcagctcgcctggcgccgatataggcaccgcctcacgctg
tgttctctgccgtttattttgccgaggaggccgccgacgaggtgctcgtcgatcgaagag
gatcggctcaggctttatacggctttgttgacttccgcgaaacctaatgaagacgagttt
gatttctaa
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