Ipomoea triloba (trilobed morning glory): 116020036
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Entry
116020036 CDS
T07384
Name
(RefSeq) protein RMD5 homolog
KO
K23333
E3 ubiquitin-protein transferase RMND5 [EC:
2.3.2.27
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
itr04121
]
116020036
Enzymes [BR:
itr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116020036
Ubiquitin system [BR:
itr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
CTLH complex
116020036
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTLH
zf-RING_UBOX
zf-RING_5
zf-C3HC4_4
zf-RING_2
zf-C3HC4
zf-C3HC4_3
Rtf2
RING_XB3-XBAT31
Prok-RING_4
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
116020036
NCBI-ProteinID:
XP_031116346
LinkDB
All DBs
Position
5:25876875..25880466
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AA seq
385 aa
AA seq
DB search
MELNSIKDAFDRVTNNKRLSASKSEEIIEQVGLEIEQALIRLQSVNDASPTNHRFVLTEL
KTKLKDIAPLTHLESTQKELNIALSKYLKILEKSFIPDISKAYRNVDCDIHTVNQIIASH
FYRGGLFDIGDCFIDESMEPEAAASKSPFLEMYPILEAMRSQNLQPALSWAAANHEKLEQ
SGSDIEMKLHRQHFVEILQNRGRDEALDYARTVFPPFGAKYMSEIQKLMACLLWAGKLDS
SPYSDLLSPVHWDKLGEELTREFCNLIGQSYESPLSVTIAAGVQGLPTLLKLANVMTMKR
QEWQSMKQLPVPVDLDREFQFHSIFVCPVSRDQATDENPPMLLSCGHVLCKQSITKLSKN
NSARPFKCPYCPSEIEAGQCRQLYI
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggagctgaatagcatcaaagatgcttttgatcgggtgacaaataataagaggctatcg
gcttctaaatctgaagaaataatagaacaagttggcctagaaatagaacaggctctaatc
agattacagtcagttaatgatgcatcaccaaccaatcacaggttcgtccttactgagcta
aagaccaagttgaaggatattgctccattgactcatctggaaagcacacagaaagagcta
aacattgcattaagcaagtatctaaagatacttgaaaaatccttcattcctgatatatca
aaggcctacagaaatgttgattgtgatatccatacggtaaaccagataattgctagtcat
ttctatcgcggtggcctgtttgatattggtgattgttttatagatgagtcaatggaacca
gaagctgcagccagtaagtctcctttcttggaaatgtacccaatccttgaagccatgaga
tctcagaacctgcaacctgctctgagttgggctgccgctaaccatgagaaacttgagcag
agtgggtctgatatcgaaatgaaacttcaccgccaacattttgtggaaattttacaaaac
agaggtagagatgaggctctagattatgctagaactgtcttcccaccctttggtgccaaa
tacatgtcagaaatccagaagctcatggcctgtcttttgtgggctggaaaacttgattcc
tcaccatactctgatcttctgtcccctgtacattgggacaaactgggagaggagcttacc
cgcgaattctgcaatctcataggccaatcctatgagagtcccttgagcgtgacaattgca
gctggagttcaggggctgccaactcttctgaagctagcaaatgtgatgacaatgaaaagg
caggaatggcaatcaatgaagcagttgccagttcccgtcgacctggacagagaattccaa
tttcattccatcttcgtgtgtcctgtgagccgggatcaggcaaccgatgaaaacccacca
atgttgttgtcatgtgggcacgttctttgtaagcaatccatcacaaagctatccaagaac
aacagcgcacggcctttcaaatgcccttattgcccatctgagattgaagcaggtcagtgt
aggcaattatacatctga
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