Ipomoea triloba (trilobed morning glory): 116020526
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Entry
116020526 CDS
T07384
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
116020526
Enzymes [BR:
itr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
116020526
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
RhgB_N
Motif
Other DBs
NCBI-GeneID:
116020526
NCBI-ProteinID:
XP_031116856
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Position
5:complement(28445254..28450046)
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AA seq
519 aa
AA seq
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MSSPRFGSSFTQQCFTIALHLLFLLVSSAIVQPTRSNHSKRNGALLTLNVTSKNVVMDNG
IIKVTLTNPSGSIAGIQFNGVKNLLNDSKQQEYRGQWDIVWKTPNRRLSVYDRFNFMAIS
DHIQRRMPTAADRVYGSQPLAYKEAVLLTHPSNPTFKGEVDDKYQYSLESKDTNVHGWIC
PKPHIGFWVITGSSEFRSGGPIKQDLTSHVGPVALSMFFSNHYAGKIHTVSLRNGEAWKK
VFGPVFIYLNSHSRYNPRYLWKNAKETMLSETKSWPYNFPMSRDYPKGHQRGTIVGRLLV
HDRYISRKLMSAKFAYVGLAPPGNAGSWQRDVKGYQFWTQTNKTGYFKIRAVRPGNYNLY
AWVPGFLGDYKYNISINITPGDNINVRNLVFYPPRNGPTLWEIGIPDRKASEFFVPDPKP
GLVNRVFINRTAEKFKQYGLWDRYTDYYPKHDLVYTVGKSDYTKDWFFAHVNRRIGRNNV
YESTTWRILFSLNNVNRIGTYTLRIALAGSSYADILVMQ
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgccgaggtttgggagctcatttacgcagcagtgcttcacaattgctcttcac
ttgttattcctacttgtttcatctgcaatcgtgcaacccacaaggtcaaatcattcaaag
cgcaacggtgcgctattgacactgaacgtcacgagtaaaaatgtagtgatggacaatggc
atcatcaaagtcaccttaaccaatccaagcggatcaattgcaggaattcaattcaatgga
gttaaaaacctactgaatgattctaaacaacaagaatatagagggcaatgggatattgtg
tggaaaaccccaaatagaagattaagtgtctatgataggttcaattttatggctatatca
gatcacattcaaagacggatgccaacagctgctgatagggtgtatggcagtcaacccctt
gcctacaaagaagctgtcttactaactcacccatccaatcccactttcaaaggggaggtg
gatgataaataccaatattcattagagagtaaagacactaatgtacacggatggatttgc
cctaagccacatattggattctgggtcattacagggagtagtgaattccgatctggtggt
cctataaaacaagatctcacctcacatgttggtccagtcgccttatcgatgtttttcagc
aatcattatgcagggaaaattcacacagtgagcttgcgaaatggggaggcatggaaaaag
gttttcggtcctgtttttatatatctcaactcgcattcacgctacaatccacgatacctt
tggaaaaatgctaaagaaacaatgttatcagaaactaaaagctggccgtataatttccca
atgtcgcgagattatcccaaaggtcatcaacggggtaccattgttggcagattgctagtt
catgacaggtacataagcagaaagttaatgtcagcaaaatttgcatacgttggactggct
ccaccaggaaacgctggatcatggcaacgagacgtcaagggatatcaattttggactcaa
acgaacaagacaggatacttcaaaattcgggctgttagacctggaaactacaacttgtac
gcttgggtccctggatttcttggagactataaatacaacattagcattaacataacacca
ggtgacaatattaatgttagaaacctcgtattttatcctccaagaaacggtccaacatta
tgggaaatcggtatccctgatcgcaaggcttcagagttcttcgtccctgatcccaaaccc
ggactagtgaatagggtgttcatcaaccgtaccgctgaaaagttcaaacaatatggacta
tgggatcgatacacagattattatcctaaacacgatttggtttacactgtcggcaagagt
gactacacaaaagactggttctttgctcatgtaaatagaagaattggaaggaacaatgta
tatgaatcaacaacgtggagaattttgttttcactaaataatgttaaccggataggaact
tatacactgcgaatagcgttggctggttcctcgtatgccgatattttagtaatgcaatag
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