Ipomoea triloba (trilobed morning glory): 116020660
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Entry
116020660 CDS
T07384
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1B isoform X1
KO
K15559
regulator of Ty1 transposition protein 103
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
itr03021
]
116020660
Transcription machinery [BR:
itr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
116020660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
CTK3
NDC80_loop
THOC7
Motif
Other DBs
NCBI-GeneID:
116020660
NCBI-ProteinID:
XP_031117002
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Position
5:complement(27832209..27841584)
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AA seq
533 aa
AA seq
DB search
MNSAFNEEILADKLSKLNSTQQCIETLSHWCIFHRSKAEQVVATWEKQFHSSEMVHKVPL
LYLANDILQNSKRKGNEFVTEFWKVLPSALKDVGEKGDDHGKNVISRLVNIWEERRVFGS
QAKSLKDVMLGKELPTPLQFGRKRSRSVRIVKRDSRSIKTKLTIGGPAEKIVSAFHAVLS
EHTNEEEEMNKCKSTVHRVKKMEKDVDMALTTANDPNRKTLSKELEEEENALKQCIQKLK
VVEANRAVLVSQLKEALNEQESELENVRTQIQVAQAQAEESSNMRKHLDDEDYVADPQPL
TTTATSVEVSAKAGGQTQKKTAAAIAAEVADKLTASTSSQYIMSSVLSTFAAEEAKNAGL
TKPSVASTSFPSTPINAANYSMTKPERPLSDPSVLMPAQAVNPPPSNPYQSVMVMHPTMQ
GQFSNSQAQYHSLPNPPSQQYLQPSGGIVGSYGYGGIAPLPPGPSPAPPYLGPLVPLAQP
PLQMSQQQQQQQQLTMPHQLALPQHPPPNFRPLPATQPPQPGMVYYSQPNRSQ
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgaatagtgctttcaatgaagagatacttgcggacaagctctccaagctcaacagcact
caacagtgcattgaaacactgtcccattggtgcattttccaccggagtaaagccgaacag
gtagttgcaacatgggagaagcagttccatagttcagagatggttcataaagttccccta
ctttatcttgctaatgatatactacagaacagcaaacggaaaggaaatgagtttgtcacg
gagttctggaaggttcttccttccgcactcaaagatgtgggcgagaaaggcgatgatcat
ggaaagaacgtgatctcaagattggttaatatatgggaagagaggagggtttttggatct
caggcaaagagccttaaagatgttatgctcggaaaagaactgcccacgccattgcaattt
ggcagaaaaaggtctcgttctgtcaggatagtgaaaagggattcaaggtctataaaaacg
aaattgacaattggaggtccagctgaaaagatagtatcagcgtttcacgcggtgctgagt
gaacacacgaatgaagaggaagaaatgaataaatgcaagtctacagtccaccgagtaaaa
aagatggagaaagatgtcgatatggcccttacaacagcaaatgatccgaatagaaagacg
ttgtctaaagagctggaggaggaagaaaacgcattgaaacaatgtattcaaaaacttaaa
gtagttgaagcaaatcgagctgtccttgtgtctcagttaaaagaagcattaaatgaacag
gaatctgagctggagaacgttcgcactcagatacaggttgcacaggctcaggccgaggaa
tcgagcaacatgcggaagcatttagacgatgaagactacgtggcagacccgcagcctttg
actacaacagctacatcagttgaagtaagcgcaaaggcaggaggacaaacgcaaaagaag
acagcagcagcgattgcagccgaggttgctgacaagcttacggcatccacctcgtctcag
tacatcatgtcgtcggttctctctacgtttgccgctgaggaggcgaagaacgcgggcctg
acaaagccttcagtagcgtcgacttctttcccgtcaacgcccatcaacgctgcaaactat
tcgatgacgaagccagaacggcccctttcagatccaagcgttctcatgccagcacaggcg
gttaaccctcctccgagcaacccgtatcagtcggtgatggtgatgcacccgacaatgcag
ggccaattctccaactctcaagctcagtatcactcgctcccgaatccaccttcccagcaa
tacttacaaccctcgggtggaattgttggctcgtatgggtatggcgggattgctcccttg
cctcccgggccatctcccgcgcctccatacttgggtcctttggtgcccttagcccagccg
ccattgcaaatgagtcagcagcagcagcaacagcaacagctaacgatgccccaccagtta
gcgttgcctcaacatccgcctccaaatttccggccattgcctgctactcagccccctcaa
cccggaatggtttactattcccaacccaatcgttcacagtga
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