Ipomoea triloba (trilobed morning glory): 116020702
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Entry
116020702 CDS
T07384
Name
(RefSeq) serine/arginine-rich splicing factor SC35-like
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116020702
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
itr03041
]
116020702
Spliceosome [BR:
itr03041
]
Common components
Common spliceosomal components
SR proteins
116020702
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_Nup35
RRM_5
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
116020702
NCBI-ProteinID:
XP_031117059
LinkDB
All DBs
Position
1:complement(35030675..35034759)
Genome browser
AA seq
274 aa
AA seq
DB search
MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFA
FVRYKYQDEAQKAVEKLDGKLVDGREIMVQFAKYGPNAEKIQKGRIIESVTKTRGRSRSY
SPRSRYRDDHRDRDYRKRSRSRSRGRSEHDRYRGRDRDRHRYRSRSGSPDYHKGRGRGRY
DDERRSRSRSYGSASPARRSPSPRRSPSPRRTPQSRDGSPSPRRSPSPRRAPQSRDGSPD
GRNEKERSPTPRSLSPRGRGAESRSPSPRSDADE
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcactttggaagatctggtcctccagacattagagacacatactctcttctagtt
ctcaacatcacttttcgtaccaccgctgatgacttgtatcctctcttcgataagtatgga
aaagttgtggatgtcttcatccccagagatcgaaggactggagactcgaggggatttgca
tttgttaggtacaagtatcaggatgaggctcagaaggcagtcgagaagcttgatggaaaa
cttgttgacggaagagaaataatggtacaatttgcaaaatatgggccaaatgctgaaaaa
attcagaagggaagaataattgagtctgtgaccaagacaaggggaaggtcaaggagctac
agtcctagatcaaggtatagagatgatcacagagatagagattatagaaagaggagcagg
agtagaagtcggggtagatctgagcatgatcgataccgtggtagggatagagatcgtcat
cggtacagaagccgcagtggaagccctgattaccataaaggtcgtggtagaggtagatat
gatgatgagaggcgtagccgaagtcgttcctatggaagtgcctctcctgctcggcgtagc
ccaagtccaaggaggagtccatctcctcggagaacccctcaatctagggatggtagccca
agtccaaggaggagtccatctcctcgcagagcccctcaatctagggatggtagtccagat
ggacgcaatgagaaagaacgctctccaactccaagaagtttgtcaccccgtggccggggg
gctgagtctcgaagcccatctccacgttctgatgctgatgaatga
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