Ipomoea triloba (trilobed morning glory): 116020797
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Entry
116020797 CDS
T07384
Name
(RefSeq) replication factor C subunit 2 isoform X1
KO
K10755
replication factor C subunit 2/4
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03030
DNA replication
itr03410
Base excision repair
itr03420
Nucleotide excision repair
itr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
116020797
03410 Base excision repair
116020797
03420 Nucleotide excision repair
116020797
03430 Mismatch repair
116020797
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
itr03032
]
116020797
03036 Chromosome and associated proteins [BR:
itr03036
]
116020797
03400 DNA repair and recombination proteins [BR:
itr03400
]
116020797
DNA replication proteins [BR:
itr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
116020797
DNA Replication Termination Factors
ELG1-RFC complex
116020797
Chromosome and associated proteins [BR:
itr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
116020797
DNA repair and recombination proteins [BR:
itr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
116020797
Check point factors
HRAD17(Rad24)-RFC complex
116020797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
Rad17
RuvB_N
AAA_11
Mg_chelatase
AAA_16
nSTAND3
AAA_5
AAA_14
SLFN-g3_helicase
ResIII
AAA_24
PhoH
AAA_assoc_2
AAA_2
AAA_28
AAA_7
AAA_19
RNA_helicase
AAA_30
AAA_25
Parvo_NS1
bpMoxR
DNAX_ATPase_lid
DUF815
NPHP3_N
AAA_18
TIP49
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
116020797
NCBI-ProteinID:
XP_031117193
LinkDB
All DBs
Position
5:complement(20960016..20966064)
Genome browser
AA seq
339 aa
AA seq
DB search
MAPVLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL
AIAHQLFGPEMYKSRVLELNASDDRGINVVRTKIKNFAAVAVGSGHQSGYPCPPFKIIIL
DEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLTEEIMSS
RILHICNEEGLNLDSEALSTLSTISQGDLRRGITYLQSAARLFGSSISSRDLITVSGVIP
EEVVHAIFSACKSGNFDLADKEVNNVIAEGYPASQMLSQLYDLVVEADDISDEQKARICK
KLGETDKFLVDGADEYLQLLDVASITMQTLCNMPQEMTY
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctgttctgcaaagctctcagccatgggtggagaaataccgaccaaagcaagtg
aaagatgtagctcaccaagatgaggttgttcgagtcctcacaaacacacttgagactgct
aattgcccgcacatgctgttttatggccctcctggcactggcaaaacaacaactgctctt
gccattgctcatcagcttttcgggcctgaaatgtataagtcgagggtgttggaacttaac
gctagtgatgaccgtggtataaatgttgttcgcacaaaaataaagaattttgctgctgtt
gctgttggttctggtcaccaaagtggctatccttgcccacctttcaagatcataatcctt
gatgaagcagattcaatgactgaagatgctcagaatgctttgcggcgcactatggaaaca
tactccaaagttacaagattcttctttatttgtaattacatcagcaggatcattgagcca
cttgcttctagatgtgccaaatttagattcaagccacttacagaagaaattatgagcagc
cgcatactacacatttgcaatgaggaaggtcttaacttggactcagaggctctttcaacc
ctcagtactatctctcaaggtgatctacgtaggggtataacatacttacaaagtgctgct
cgcttgtttggatcatctatttcatccagggatttgataactgtttctggggtaatccca
gaggaagttgttcatgcaatattttcggcttgtaaaagtggcaactttgacttagcagac
aaagaagtgaataatgtaatagcagaaggatatccagcttctcagatgctttctcagcta
tatgatttagttgtcgaagcagatgacatatctgatgaacagaaagcaagaatatgcaag
aaattgggagaaacagataagtttcttgtagatggagcagatgaatatttgcagcttttg
gatgttgcaagcatcactatgcaaacactttgcaacatgccgcaggaaatgacctactag
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