Ipomoea triloba (trilobed morning glory): 116020886
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Entry
116020886 CDS
T07384
Name
(RefSeq) flap endonuclease GEN-like 2 isoform X1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
itr03400
]
116020886
DNA repair and recombination proteins [BR:
itr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
116020886
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Chromo_SEND1
XPG_I
XPG_N
Chromo_2
Chromo
Chromo_shadow
Motif
Other DBs
NCBI-GeneID:
116020886
NCBI-ProteinID:
XP_031117310
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All DBs
Position
5:25918241..25923246
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AA seq
624 aa
AA seq
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MGVKNLWDILDSCKKTLPLNHLQNKRVCIDLSCWMVQLQKVNKSHCALKDKIYLRGLFHR
LRALIALNCSLIFVTDGAIPAIKSATYRRRLNVGNELSQEEPNIKQLSSIRRNSGSEFSC
MIKEAKVLGRALGIPCLDGIEEAEAQCALLNSESLCDGCFTADSDAFLFGARTVYRDICL
GDGGYVVCYEMDDIERKLGFGRNSLITLAVILGGDYSQGVYGIGRESACQIVKSLGDSTV
LQRIASEGLSFVKKTKNSKRHIEAMQCDNKENFPINKDVLKGIKCDLLQRDKDKQVLQVI
NAYLEPRCHSVDSDGVHRVLAVYPFERNQFQQICAKYFDWPPEKTDEYILPKIAERELRR
FSNLRSASTKVGLQVSLDEMPIKCPVSSIIKERKVQGRDSFEVSWDGVEGLETSIVPADL
VQSACPEKIMEFQERRAQRKKPKSRRRRVDNRPPSSEIELKLQALLLEIDQENTTVFHGS
IRDATLRHTQLLTTLEGGQSRENAVPGSPHVTDLSSSPPSHACLPQLYLVQYAIPASPEV
TDLSSPPPPRKNAEVETEVIDLLSPPQASRHDGGSSELQIDDVQRPVDVIEVMSDSDNEM
FSPDHLKKARELRSFLASIREDIS
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgaagaatctgtgggacatcttggattcttgcaagaaaactctcccccttaac
catctccagaacaagagggtgtgcatagatctatcttgctggatggttcaacttcagaaa
gtaaacaaatcccactgtgctctcaaggacaagatttatcttaggggtctcttccaccgc
ctcagagctctcattgccttgaattgcagccttatctttgttactgatggagcaattcct
gctatcaaatctgctacttatagacggagattaaatgttggaaatgagctttcccaggag
gagccaaatataaagcaactgtcatcaattcgaagaaacagtggatccgagttttcatgt
atgataaaagaagctaaagttcttgggagggcacttggcattccttgcttagatgggatt
gaagaggctgaagcacaatgtgcgttactcaactcagaatcattatgtgatggatgtttt
actgcagattctgatgcattcttgtttggagcaaggactgtatatagagacatttgcctt
ggcgatggtggttatgttgtttgttatgaaatggatgatatcgagagaaaacttgggttt
ggaaggaattccttgattactcttgctgttatccttggaggggattattcacaaggtgtt
tacgggattggcagggagtctgcttgtcagattgttaaatcactcggtgacagtactgtt
ctgcaacgaatagcatcagaaggattgtctttcgtaaagaagaccaaaaattcgaaaagg
cacatcgaagccatgcaatgtgataacaaagagaactttcctatcaataaagatgtccta
aaaggaattaaatgtgatttactacaaagggacaaagacaaacaggtgttgcaagtaata
aacgcttatttggagccgaggtgtcattcagtcgactctgatggtgtgcatagggttctt
gcagtatatccattcgaacgcaaccaatttcagcagatatgtgcaaaatattttgattgg
cctcctgagaaaacagatgagtacatccttcctaagattgctgaaagagaattacgacga
ttttctaatctgcgatctgcttcaacaaaagtaggactccaggtttccttggacgagatg
ccaattaagtgtccggtctcgagcattatcaaggaaagaaaagttcagggaagggacagc
tttgaagtatcttgggatggagttgaaggactagagacctcgatagttccagcagatctt
gtacagagtgcttgtcccgaaaagattatggagtttcaggaaagaagagctcaaaggaag
aaaccaaaatcaagacggagaagagtggacaacaggccgccctcgagtgaaatcgagctg
aagctgcaagcgctgctgctggaaattgatcaagaaaacacaaccgtcttccatggatcg
attcgtgatgcaacactacgccatacacaactgcttacaacgttagaaggcggccagtcc
agggaaaacgctgttccaggatcacctcatgtgactgatctctcaagttctccaccgagc
catgcttgtctacctcagctttatctcgtgcaatacgctattccagcatcacctgaagtg
actgatctctcgagtcctccacctccacgcaagaatgcagaagtcgaaactgaagtaatt
gatctcttgagccctccacaggctagccgccatgatggaggaagctcagagcttcaaatc
gatgatgttcaacgccccgttgatgtaattgaggttatgagtgattcagacaatgaaatg
ttctcccctgaccatctcaagaaagcaagagagctaagatctttcctagcaagcattcga
gaagacatttcttga
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