KEGG   Ipomoea triloba (trilobed morning glory): 116020916
Entry
116020916         CDS       T07384                                 
Name
(RefSeq) SART-1 family protein DOT2-like isoform X1
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
itr  Ipomoea triloba (trilobed morning glory)
Pathway
itr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:itr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    116020916
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:itr03041]
    116020916
   04121 Ubiquitin system [BR:itr04121]
    116020916
Spliceosome [BR:itr03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    116020916
 Complex C
   U4/U6.U5 tri-SnRNP specific factors
    116020916
Ubiquitin system [BR:itr04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    116020916
SSDB
Motif
Pfam: SART-1
Other DBs
NCBI-GeneID: 116020916
NCBI-ProteinID: XP_031117341
LinkDB
Position
5:4553083..4558637
AA seq 523 aa
MRRTTEELSGAKILHGLDKVLEGGSVVLTLKDQSILSGDDVNQEVDVLENVEIGEQKRRD
DAYKAAKKKTGIYDQSDEFGSEKKMLPQYDDPMEEEGVTLDGTGRFSGGAEKKLEELRRR
IQGVATKNHTEDLNSSSRILTDYYTQEEMLQFKKPKKNKSLRKKVKLDIDALEAEAISTG
LGAGDLGTRNDKTRQALKEEKERAEAEMQSKAYQAAYTKAQEASKALRPEQIITTKAKED
DAVFDDDDEELRKSLVRARQLALKKQEAGKFVTEAIALLATSNANNSTVDNNSNPAIGDL
QENKVVFTKMQEFVWGLQLDEDAKKTEAKDVFMEDVAPNSPEAAIIEDCGWTEVKETENN
EPAIEENEYAIREAAVGKGLSRALRLLKERGTLKETIEWGGRNMDKKKSKLVGIIDEEGP
KEIHIERTDEYGRILTPKEAFRLLSHKFHGKRPCKMKQEKHMRQYQEELKIKQMKNSDTP
SQSVERMREAQEKLKTPYLILSGHAKPGQTSDPRSGFAIVENG
NT seq 1572 nt   +upstreamnt  +downstreamnt
atgcgacgcactactgaagagctgagtggggcaaaaattcttcatgggcttgacaaagta
cttgaaggaggttcagttgtcttaactctcaaggatcagagcatactttctggtgatgat
gtaaatcaagaggttgatgtgcttgaaaatgttgaaattggagagcagaagcggagggac
gatgcatacaaggctgcaaagaagaaaacagggatttatgatcagagtgatgagtttggt
tctgaaaagaaaatgcttccacaatatgatgacccgatggaagaggagggtgtgaccctt
gatggaactggacgttttagtggtggtgcagagaagaaactggaggagctccggagaaga
attcagggggttgccacaaaaaaccacactgaagatctcaattcctctagtagaatattg
acagactattatactcaagaagaaatgcttcaatttaagaagccgaagaaaaacaaatct
ctaagaaagaaagtgaagctggacatagatgcccttgaagcagaggctatttctactgga
ctgggtgctggggatcttggtactcggaatgataagacaaggcaagccctaaaggaggaa
aaggagagagctgaggctgagatgcaaagtaaggcataccaggctgcatatacaaaggct
caggaagcatctaaagcacttcgacctgagcaaattattaccaccaaggcaaaggaagat
gatgctgtatttgatgacgatgatgaggagcttcgaaaatcattggtaagggcaagacaa
ttagctctgaaaaaacaagaggctggtaaatttgtaacagaggccattgcattgcttgcc
acttcaaatgcaaacaattcaactgtagataataactccaaccctgcaattggagacttg
caagaaaataaggttgtcttcacaaaaatgcaagagtttgtttggggtcttcagcttgat
gaagatgcgaaaaaaacagaagctaaagatgttttcatggaagatgttgcaccgaattct
cctgaagcagcaataattgaggattgtggttggacagaggtgaaagaaactgagaataat
gaaccagccatagaggagaatgaatacgcaatacgtgaagctgccgttggaaaggggtta
tctagagctctcaggcttctgaaagaacgaggaacacttaaggaaacaattgaatggggt
ggtcgaaacatggacaagaagaaaagcaagcttgttggcattattgacgaggaaggaccc
aaggaaatacacatagagaggactgatgagtatggccgaattttgactccaaaagaggcc
ttccggttgctttcgcataaatttcatggaaagcgcccttgcaaaatgaaacaagagaaa
cacatgcgccaataccaagaagagctaaagataaaacaaatgaaaaattcagacacacca
tcacaatctgtggagagaatgagggaagctcaagaaaaactgaagactccttatcttatt
cttagtggacatgctaaaccagggcaaactagtgatcccagaagtggttttgctattgtt
gagaatgggtga

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