Ipomoea triloba (trilobed morning glory): 116021138
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Entry
116021138 CDS
T07384
Name
(RefSeq) probable pectate lyase P56
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr00040
Pentose and glucuronate interconversions
itr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
116021138
Enzymes [BR:
itr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
116021138
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GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
NosD
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
116021138
NCBI-ProteinID:
XP_031117608
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All DBs
Position
5:29728440..29731204
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AA seq
458 aa
AA seq
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METYNKMNWPLVLVLLCAFVAVTPAMAGAEIGDIYSSDTYWVNRKAEAMEHVMKAYTSHP
EHITRNLTAEIHSMKNETMGDHDFDELELVNGTRRNLRARRYKGPCKVSNPIDRCWRCDK
NWANDRKKMANCALGFGAGTTGGKDGPIYVVTDSSDDNMEEPKNGTLRHAVIQDGPLWII
FGSSMTITLQHELLVTGDKTIDGRGAYVKIAGGSGITVQFVKNVIIANLKIKQIKATSGG
IIRDSTTHKGLRTFDEGDGITVFGSSNVWIDHCSMSKCEDGIIDAVKGSTAVTISNCHFT
DHSKVLLFGANNWDPIDKVMQITVAFNHFGKRLEQRMPRCRWGMFHIVNNDYTYWEMYAV
GGSAGATIISQGNRYIAPPGLYFKEVTHRDWPDDSWKGWTWVSDSDLFMNGAFFLPSGDP
AGAQKYGLLDLVEKMPGSAVGRITRFSGALSCKIGKPC
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggagacgtataacaagatgaattggccgctcgttctcgtgttgttgtgtgcattcgtg
gctgtcacccccgccatggcgggggccgaaattggcgatatatatagctccgacacatac
tgggtgaaccgcaaggcggaagctatggagcatgtcatgaaagcctacacctcacatccc
gaacacatcacccgtaatctcactgcagagatccatagtatgaagaatgaaacaatgggg
gatcatgactttgatgagttggagctggtgaatggtacaaggaggaacttgcgggcgagg
aggtacaaagggccatgcaaggtgtctaaccccattgatagatgctggaggtgcgacaag
aattgggcaaatgaccgcaagaaaatggcgaattgcgccttgggattcggcgccgggacc
accggaggaaaggacggtccgatctacgtcgtgacggactcgtcagatgacaacatggag
gagccgaagaatgggaccctcaggcatgcggtcatccaggacgggccactgtggatcata
ttcgggtccagcatgacgatcacgctgcagcacgagctactagtgacgggcgacaagacc
attgatgggcgcggcgcgtacgtgaaaatcgcaggcggctcgggcatcacggtgcagttt
gtgaagaacgtcatcatcgcgaacttgaagatcaagcaaatcaaagccacctccggtggc
ataatcagagactccactacccataagggtctcagaactttcgacgaaggagatggcatt
actgtctttggatcctctaacgtttggatcgaccattgttccatgtccaagtgcgaagac
ggaattatagacgccgtcaagggctccaccgccgtcaccatctccaactgccacttcacc
gatcactctaaggtgttactctttggggccaacaactgggacccaatcgacaaggtgatg
caaataacggtggccttcaaccacttcggcaaaaggttggagcagaggatgccgcggtgc
aggtgggggatgtttcacatagtcaacaacgactacacatattgggaaatgtacgctgtg
ggaggttccgccggtgccaccatcatcagccagggcaaccgctacattgccccgcccggt
ctgtacttcaaggaggtcacccacagggactggcctgacgattcctggaaggggtggacc
tgggtctcggactcagatttattcatgaacggcgctttcttcttgccgtcgggagatccg
gcaggcgcccaaaagtacggtctactcgacctcgtcgaaaaaatgcctggctctgctgtc
ggaagaatcacgaggttctctggtgctctttcatgcaagatcggaaagccgtgctaa
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