Ipomoea triloba (trilobed morning glory): 116021146
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Entry
116021146 CDS
T07384
Name
(RefSeq) uncharacterized protein LOC116021146
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
itr03016
]
116021146
Enzymes [BR:
itr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
116021146
Transfer RNA biogenesis [BR:
itr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
116021146
Prokaryotic type
116021146
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
116021146
NCBI-ProteinID:
XP_031117617
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All DBs
Position
5:29958070..29963005
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AA seq
534 aa
AA seq
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MAKSAQLSKVSLAFLRFTSTASFARPRSIAVPSKLKLKLFSTTSTSYPLQYEMIVSRPVE
PPRHHGRRRSLRSPIANSKPTESPEPDSELGFDDWVERKLSSTPSSSQRPDDRTNDTDTG
MDKAKRKYYNKRRKRMFGSDSEDEGNRRDGSDFVELKQEVVELRTLHKKEEELHFYDAFA
YPWEKDKHYKMVYQLEKKYFPDQCFDKAFLEPGQSNESKPKGKRKIGKSEDRKGEAADRG
EDTGLVFFETEEKTENRESDNKDEKVDVSEKKVEEFFKCLKKVPNDSDRVGVSSAEPFFS
SRNTGLPPKWDSPAGTVVLVNKPKGWTSFTVCGKLRRLTKVKKVGHAGTLDPMATGLLIV
CVGKATKLVDRYQGMIKGYSGVFRLGEATSTWDADSPVIQREPWEHIKNEDLRKAAASLS
GEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFQFDVERSLEDRQNVIFRVIC
SKGTYIRSLCADFGKALGSCAHLSALRRDSIGEYKANDAWEFQELEEAITKGYL
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaatcggcgcaactctccaaagtatcgctcgccttcctccgcttcacgagcaca
gcttctttcgcgaggccacgctccatcgccgttccctcaaagcttaagctaaagcttttc
tcaacgacctcaacttcatatccactccaatatgagatgatcgtatctcgcccagtcgag
cccccgcggcaccatggtcgccgccgtagcctacggagccccatcgcaaattccaaaccc
accgagtctccggaaccggactcggaactcggattcgatgattgggtcgaaaggaaatta
agctcaactccgtcttcttcgcaaaggccagatgaccggaccaatgatactgatacagga
atggacaaggctaaaaggaagtattacaataagaggaggaaaagaatgtttggttcggat
tcggaagacgagggtaaccgccgggatggaagtgattttgtggaactgaaacaagaagtt
gtggagctacgtacgttgcataagaaagaggaggaattgcatttctatgatgcatttgcg
tatccttgggagaaggacaagcattataagatggtttatcaattggagaagaagtacttt
cctgatcagtgtttcgataaggcttttctcgagcctggtcagtccaatgagagtaaaccg
aaggggaaaaggaaaattggcaaaagcgaagatcgtaaaggagaagctgcagatcgcggg
gaagatacaggattggtgttttttgagactgaagagaagactgagaatagagagagtgat
aataaggatgagaaagtggacgtttcagagaagaaagttgaggaattcttcaagtgtttg
aagaaagttccaaatgacagcgacagagttggtgtttccagtgccgagccattcttttct
tcaaggaatacagggcttcctcccaaatgggatagccctgctgggactgtggttttagtg
aacaaaccaaaaggttggacttcatttacagtttgtggaaagttgcgccgcctaaccaaa
gtgaaaaaggtaggccatgctgggactcttgatccgatggccactggtttattgattgta
tgtgttggtaaagcgacaaagctggttgatagataccagggtatgattaagggttatagt
ggagttttccgactaggagaagccacctctacatgggatgcggattccccggttattcaa
cgtgaaccatgggagcacatcaagaatgaggatctaagaaaagctgctgcatccctttct
ggagagatatggcaagtccctccaatgttctctgccatcaaagttggtggtgaaaagatg
tatgagaaagcaagaagaggtgaaagcattgaactttcaccaagaaggatttcaatattc
cagtttgacgttgaacgtagtttagaggacagacaaaacgtgattttccgggtaatatgc
tcaaaaggaacctatattcgatcgctctgtgcagattttgggaaggctctgggcagttgt
gctcacttgtcagccttacgaagagattcaattggagaatacaaagcaaatgatgcttgg
gagtttcaagagttggaagaagcaataaccaaaggatacttgtag
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