Ipomoea triloba (trilobed morning glory): 116021233
Help
Entry
116021233 CDS
T07384
Name
(RefSeq) (-)-germacrene D synthase-like
KO
K15803
(-)-germacrene D synthase [EC:
4.2.3.75
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr00909
Sesquiterpenoid and triterpenoid biosynthesis
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
116021233
Enzymes [BR:
itr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.3 Acting on phosphates
4.2.3.75 (-)-germacrene D synthase
116021233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Terpene_synth_C
Terpene_synth
Terpene_syn_C_2
Zn_ribbon_3CxxC_2
Motif
Other DBs
NCBI-GeneID:
116021233
NCBI-ProteinID:
XP_031117707
LinkDB
All DBs
Position
5:14518714..14522640
Genome browser
AA seq
562 aa
AA seq
DB search
MAANSQLLSAIPSNQTPMDEVTRRSANFHPTIWGDYFLTYSSQPMEVDTEDWLEHQKLKE
EIKNMLVEAPNISSQKLDLINKIQRLGVYYQFENEIDASLEYIFKAYDDFNDGEDENDLY
VVSLRFRLLRQDGYHVSAGVLEKFKDGNGKFKESLINNVQAMLSLYEASHLRVHGEQILE
EALTFTTSQLESMLPHLSNPLRSQISEALKQPIRRRLTRLDAQKFISTFEHDGTQDALLL
KFAKLDFNLLQRQHQRELGSLTRWWKGLDVPNKLPFARDRLVECYFWTLGTYFEPKYQLA
RKFILKIISLTSIVDDIYDVYGTPDELKLFTNAVQRWDVSATNQLPEYMRSTYIYLLDTY
AEMEKELANEGESYRVNYAKIEMTKLVGAYYEESKWYNDGCSPTFEEYMKVALVTSGYTM
LATTSLVGMQEDFLTKEAFDWMISGPLIVRASEIVGRLMDDITGYEFEQQRGHFESSVQI
FMKEYGKSKEETTTELQEQVINAWKDINQECLKPTIFPMPILTRILNLTRVIDLLYHDGD
LYTHSKTKLKQIITSTLVNPIL
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaattcccaactcctctcagctattccatcaaaccaaactccaatggatgaa
gttactcgtcgctctgcaaattttcatccaaccatttggggagattacttccttacttat
tcttctcaacccatggaagtggatacagaagattggctagagcatcaaaaattgaaagaa
gagataaagaacatgcttgtggaagccccaaacatttcttcccaaaaattggacttgatt
aacaagatccagcgtttaggagtgtattatcagtttgaaaatgagattgacgcttcattg
gaatacatattcaaggcatatgatgatttcaatgatggggaagatgaaaatgatctttat
gttgtctctttgcgttttcgattgcttagacaagatggctatcacgtatcagctggtgtg
cttgaaaagttcaaggacggtaatggaaagttcaaggaatcgttaatcaacaatgtacaa
gcaatgctgagcttgtacgaagcatcacatcttagagtgcatggagagcagattttggag
gaagcactaacatttaccacttctcaactagaatccatgctaccacacttgagcaatcct
cttagatcacaaatcagtgaagcactaaagcaaccaattcgcaggagattaacgaggcta
gacgcacaaaagttcatatcaacttttgaacatgatggaacacaagatgctttattgttg
aaatttgcaaaattagacttcaacttgctgcaaaggcaacatcaaagagagctaggtagt
cttacaaggtggtggaaaggattagatgttccaaataaattgccttttgcaagagatagg
ttggtggaatgctacttttggacattgggaacgtattttgaaccaaaatatcaactcgca
aggaaatttattcttaaaattatttctctaacttcaattgttgatgatatttacgatgtt
tatggaacccctgatgagctcaagcttttcactaacgcagtgcaaagatgggatgttagt
gctacaaatcaattaccagaatatatgaggtctacttacatttaccttcttgatacttat
gctgaaatggagaaagagttagctaatgaaggtgaatcgtatcgcgtcaactatgcaaaa
attgagatgacaaaattagtgggagcatattatgaggaatccaagtggtataatgatggt
tgctctccaacatttgaagagtacatgaaggttgcattggtaacgtcgggttacacgatg
ctagcaacaacttctttagtaggcatgcaagaagactttttaactaaagaagcctttgat
tggatgattagcggaccattaattgtgagggcttcagagatcgttggcagattaatggat
gacataactggatatgagtttgaacaacaaagaggacactttgaatcatctgtgcaaatc
tttatgaaagaatatggaaaatcaaaagaagagaccacgacggagttgcaagaacaagtc
atcaatgcctggaaagacattaatcaagaatgtctcaagcctactattttccctatgcct
atactcacccgaattctcaaccttacaagagttatagatttgctataccatgatggagat
ttgtatacacattccaaaaccaagttgaagcagatcattacctctacgttggttaatccg
atcctgtga
DBGET
integrated database retrieval system
