Ipomoea triloba (trilobed morning glory): 116021239
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Entry
116021239 CDS
T07384
Name
(RefSeq) uncharacterized protein LOC116021239
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
116021239
Enzymes [BR:
itr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
116021239
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
116021239
NCBI-ProteinID:
XP_031117713
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Position
5:complement(28463080..28467239)
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AA seq
673 aa
AA seq
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MVSVKQSRRTVAGWFVIAFHLLLLLDYSSAAAPKGPSGAPQGSCKPVKVEVVEDSVMMDN
GIVSVNFSKSTGSIVGIKYQGIDNLLSTTNKETDRGYWDIDWNRPNVKASTSFKILATNF
TVISKAENQAEISFTKVFKTGDETDIPINFDKRFIMLAGSSGFYTYAIYDHPKGGPDVDI
DQTRIVFKLSTTSFKYLAVSDKIQGDMPSYAEREASPKLAYKEAVLLKETENPKLKGKVD
DKYAFALESQDMGVYGWISPKPHVGFWVITASNEFRLGGPIKQDLTCHCGPFALSMFLSL
HYSGEHWGIKLRNGEAWRMVFGPVFAYVNSDTGTDHKTLWEDAKKKMLEETKNWPYSFIK
SDDYPIKRGTVSGRLLIHDVALSKTDTPAKSAHVGLAAPGAAGSWQYESKSYQFWTRTDD
TGNFKISAIRPGTYSLYAWAPGHLGDFIHKANLTIKPGDDIKVGDLVFAPPRNGTTLWEI
GTPDRRAWEFFIPDPVPELQNSLLGNGTEKFRQYGLWDRYTDLYPKTDLVYNVGKSDPAK
DWFFAHLNRKTGNNTYVATIWTVTFPLEAVDAKGSYTLRIAVASSTHGVLMIWVNSDAEK
KKANFEGRVEGRDNAIARHGIHGLYAEVRFAIPGSVLVKGENTLKIRQAKGEYVFDGVMY
DYLRLEAPPQKST
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcagtgaagcaaagccgccgtacagttgcaggctggtttgtaatagccttccac
ctcttacttctacttgattattcttctgcggcagcccctaaaggaccctccggagcgcct
caagggtcgtgtaagcctgtgaaagtggaagtcgtagaagattctgtgatgatggacaat
ggcatagtcagtgtcaactttagcaaatcaaccggttctattgtagggattaaataccaa
ggaattgataatttattgtcaactactaataaagaaacagacaggggatattgggacatc
gattggaacagaccgaacgtgaaagccagtacatcttttaagattctagcaacaaatttc
acggtaatatcaaaagctgaaaatcaagctgagatttccttcacgaaagtattcaagacc
ggtgatgaaactgatatccccatcaactttgacaaaaggtttattatgctagcgggaagt
tctggtttctatacatacgcaatatacgatcaccctaaaggaggcccagacgttgatatt
gatcaaacaaggattgtattcaagctaagcacgacctcgttcaaatatttggctgtatcc
gataaaattcaaggagatatgccaagttatgcagagcgagaggccagtccaaaacttgca
tacaaagaagctgttttactaaaggaaactgaaaatcctaagctcaaagggaaggtggac
gataaatatgcgttcgcattagaaagtcaagatatgggtgtatatggatggatttctcct
aaaccacacgtagggttctgggtaattacggcaagtaatgagttccgtttgggtggacct
ataaagcaagatctcacttgtcattgcggtccatttgccttatcgatgtttcttagcctt
cattattctggggaacactgggggattaagctgcgaaatggtgaggcttggagaatggtt
tttggcccagtttttgcatatgtcaactcagatacaggaaccgaccataaaaccctctgg
gaagacgccaagaaaaaaatgttagaagaaaccaaaaattggccgtacagtttcataaaa
tcagatgactatcctattaaaagaggaacagttagcggtcgattgctaatccatgatgtg
gccctgagtaaaactgatacgccggcaaaatctgcacacgttgggctagctgcacctggg
gcggctggatcatggcaatatgagagcaagagctatcagttctggactcgaacggacgac
actgggaacttcaagattagtgctattaggcctggaacgtacagcttatacgcatgggct
cctggacatctcggagactttatacacaaggctaatcttaccatcaaaccaggagatgat
attaaggttggtgatcttgtttttgctcctccaagaaacggtacaacgttgtgggaaatt
ggcactccagatcggagggcttgggagttcttcatccctgatcctgtccctgaactacag
aactccctactaggcaatggcacagaaaagtttagacaatatggattatgggaccgctat
acagacctgtatcccaagactgatttagtttacaatgttggcaaaagtgatcctgcaaaa
gattggttttttgctcatcttaacaggaaaactgggaataacacttatgtagcaactata
tggacggttacatttccacttgaagcagttgatgcgaaaggaagctatacactccgaata
gcagtggcttcttctacccatggcgtccttatgatttgggtaaatagtgatgcagagaag
aaaaaggcgaatttcgaagggagagtggaagggagggataatgcaatagcaagacatgga
attcatgggctatatgcagaggtgaggtttgcgattccaggatctgtacttgtgaaagga
gagaacaccttaaagataaggcaggcaaaaggtgaatatgtcttcgatggagtcatgtat
gactacctccgtttagaagcgccgccacagaagagcacctga
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