KEGG   Ipomoea triloba (trilobed morning glory): 116021250
Entry
116021250         CDS       T07384                                 
Name
(RefSeq) splicing factor 3B subunit 4-like
  KO
K12831  splicing factor 3B subunit 4
Organism
itr  Ipomoea triloba (trilobed morning glory)
Pathway
itr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:itr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    116021250
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:itr03041]
    116021250
Spliceosome [BR:itr03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    116021250
 Complex B
    116021250
 Complex C
   U2 SnRNP specific factors
    116021250
SSDB
Motif
Pfam: RRM_1 RRM_7 OB_RNB RRM_5
Other DBs
NCBI-GeneID: 116021250
NCBI-ProteinID: XP_031117726
LinkDB
Position
5:complement(23136167..23140019)
AA seq 357 aa
MATRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR
VTNAHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSVDVGANLFVGNLD
PDVDEKLLYDTFSAFGVIVSNPKIMRDPETGNSRGFGFISYDSFEASDAAIEAMNGQYLC
NRQITVSYAYKKDTKGERHGTPAERVLAASNPSSQKSRPHTLFASGPPTLPPVAQANGTV
AAPVPPRPFANGPFPPPVAQAIHPPPPMQSTAYPPMQLPPPQSWQAQPPQPGTVGFPPQQ
FRGGPAMPPPPQVAPPMNRPPPPPMGMGAPPMWRPPPPPQQLTGGYQMSMPPPPPAN
NT seq 1074 nt   +upstreamnt  +downstreamnt
atggcgacccgtattgctcctggagtcggggcaaaccttctcggtcaacattccgctgag
cgcaatcaagacgccacagcctacgtcggaaacctcgatcctcaggtttcagaagaatta
ttatgggagctgtttgttcaagcaggcccagttgttaatgtctatgtccccaaggataga
gttaccaatgctcatcaaggctatggctttgtagagttccgaagtgaagaagatgctgac
tatgcaataaaggtgttgaatatgattaaactttatgggaaacctatacgagtgaataag
gcatcacaagataagaagagtgttgatgttggtgctaacctctttgttggaaatcttgat
cctgatgtagatgagaagcttctatatgacacattcagtgcttttggagtaattgtttca
aatccaaagataatgagagaccctgagacggggaattctcgtgggtttggttttataagt
tatgattcgtttgaggcatctgatgctgccattgaggcgatgaatggccaatatctttgt
aacaggcagattacagtttcctatgcctacaagaaagatacgaagggtgaacgtcatggg
acacctgcagagagagttttagctgcgagcaatccaagtagccaaaagagtaggccccat
acactctttgctagcggacctccgacactcccccctgtggcgcaagccaatggtacagtt
gctgcgccagtgcccccacggccttttgcaaatggcccttttcccccacctgttgctcag
gcaattcacccgccgccacccatgcagtctactgcttatccgccaatgcaattaccaccg
ccacaatcatggcaggctcagcctccacaacctgggacagttggctttcctccacagcag
tttagaggaggcccggccatgccaccacctccgcaggtagctccacccatgaataggccc
ccgccaccaccaatgggaatgggtgctcctcctatgtggcggccgccaccacctccccag
caattaactggtggataccaaatgtcaatgccaccacctccacctgcaaattaa

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