Ipomoea triloba (trilobed morning glory): 116021286
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Entry
116021286 CDS
T07384
Name
(RefSeq) uncharacterized protein LOC116021286 isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
116021286
Enzymes [BR:
itr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
116021286
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
RhgB_N
DUF2761
Motif
Other DBs
NCBI-GeneID:
116021286
NCBI-ProteinID:
XP_031117771
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Position
5:complement(28482625..28487567)
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AA seq
700 aa
AA seq
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MPENMGCGLLRRFLDWWHLEIIIGLLFLSPAAECQRRTLKGAGVQLDIQEHQAVMNNGIL
SVSLSVPDGLVTGISYQGINNLLETKNPENDRGYWDAIWHGPGIDGELDKLQGTSFEIIT
NDESEVEISFTRTWDASQNNVAPVNIDKRFIMLRDTPGFYTYAIFQRLEGFPGVRMEESR
VVFKPRQDLFHYMAVSDDRQRFMPMPEDRLSGQVLDYPEAVLLTRPSNRALKGEVDDKYF
YSSENKDNKVHGWVCTDPPVGIWMITPSSEFRTGGPFKQELTSHVGPTMLSTFVSRHYAG
EDLDVIFQDGEPWTKVLGPVFVYLNTDTAAENDPSVLWNDAKNKMNQEVASWPYDFVHSI
DYMKSDQRGIVRGRLFVHDWFVDERSVPASYAYVGLAMPGAPGSWQRENKGYQFWTQADN
DGNFFIRVRAGTYNLYATVPGRIGDYKYVTDISVIPGSDVELGDLVYKPPRNGATLWEIG
VADRTAAEFYVPTPSPMFRVHDFEDEGPNKFREYGLWKRYTDLYPLRDLVYTVGTSDYAR
DWFYAHVTRNFENGTYGATTWSIVFDLESVNRASYYTLQLALASAQEAELQVRFNDGEAQ
PPHFTTGTIGSDNAIARHGIHGLYWLFSVRIAGTWLVQGRNIIFLTQAGATSPWRGVMYD
YIRLEGPDQYRDPSDAAFKSTSLPSLFSLSISLFLLLFSW
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgccggaaaatatggggtgtggattgctacggaggtttcttgattggtggcatctggag
attataattggactgctgttcttgtccccggccgcggagtgccagaggagaacgctaaag
ggagctggggtccaactagacatacaagaacaccaagcagtgatgaataatggcattctc
agtgtttcactctcagttccagatggtcttgtgacagggatatcgtaccaaggaatcaac
aatttactggaaacaaaaaaccctgaaaacgatagaggatattgggatgctatttggcac
ggcccaggaatcgatggagaattggacaaattgcaagggacaagtttcgagatcataaca
aatgatgaaagtgaagtagagatttcatttacaagaacatgggatgcctctcagaataat
gtagctccagtaaatattgacaaaagatttataatgctgcgtgataccccggggttctac
acgtatgctatatttcaacgtttagaaggatttccaggggtgcgtatggaagaaagcagg
gttgtattcaaacctagacaagacttgtttcattacatggctgtctcggatgataggcag
aggttcatgccaatgcctgaggaccgtcttagtggccaggtacttgattaccccgaagca
gttctcttgacacgcccgagcaatcgagctctcaaaggagaggtggatgataagtacttc
tactctagtgagaacaaagacaataaggttcatggatgggtatgcactgatccccctgta
ggaatttggatgatcactccaagcagcgagtttcgcaccggtggacctttcaagcaagag
ctaacatcccatgttggtcctaccatgctttctacatttgttagtaggcattatgccggg
gaggatctagatgtcatatttcaagatggagaaccgtggacaaaggttttaggtcccgtg
tttgtgtatctcaacacagatactgctgctgagaacgatccttctgtgctctggaatgac
gcaaagaacaagatgaatcaagaagttgcaagctggccgtatgattttgtgcattcaata
gactacatgaaatcagatcaaagaggaattgttaggggtagattatttgttcatgactgg
ttcgttgatgaacgatctgttccagcatcatatgcctatgtggggttggcgatgccaggt
gctcctggatcatggcaaagagaaaacaaggggtaccaattctggacccaagcagataat
gatgggaacttctttatcagagtaagagcaggcacttataatctgtatgcgacagtcccg
ggaaggattggagactacaaatatgtaacagacatcagtgttataccaggttccgatgta
gaactgggggatttagtctataagcctccaagaaacggagctactctttgggaaataggt
gttgcagaccgtacggctgctgaattttatgtcccgactcctagccccatgttcagagtt
catgattttgaagatgaagggccaaataagtttagagaatatggcctatggaaacgctat
acggatctgtatcctctcagagatcttgtgtacactgttggaacgagtgattacgctaga
gactggttttatgctcatgttaccaggaactttgaaaatggtacatatggagcaaccact
tggagtattgtgtttgaccttgaaagtgtgaatagagcttcatattacacactccaattg
gcactggcatcagctcaagaagcagaactacaagtgcgtttcaatgacggagaagcgcaa
cccccgcattttacaacggggactataggcagcgacaacgcgatagcaagacatgggatt
catgggttgtattggctgttcagtgttagaatagcaggaacatggctagttcaaggaagg
aacatcatatttctgacacaggcaggagccaccagcccttggagaggtgttatgtatgac
tatattaggttagaaggtcctgatcagtatagggatccttctgatgctgcatttaaatct
acttctcttccctctcttttttctctctctatttctttgtttcttcttttattttcttgg
tga
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