Ipomoea triloba (trilobed morning glory): 116021614
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Entry
116021614 CDS
T07384
Name
(RefSeq) transcription initiation factor TFIID subunit 2 isoform X1
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116021614
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
itr01002
]
116021614
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
itr03021
]
116021614
03036 Chromosome and associated proteins [BR:
itr03036
]
116021614
Peptidases and inhibitors [BR:
itr01002
]
Metallo peptidases
Family M1
116021614
Transcription machinery [BR:
itr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
116021614
Coactivators
SAGA/TFTC/STAGA complex
116021614
Chromosome and associated proteins [BR:
itr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
116021614
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M1
HEAT_2
UPF0253
Motif
Other DBs
NCBI-GeneID:
116021614
NCBI-ProteinID:
XP_031117924
LinkDB
All DBs
Position
6:complement(16870090..16884149)
Genome browser
AA seq
1588 aa
AA seq
DB search
MAKPRKGKSEEQKGENTEAVIRHQKLCLSIDMEKRRIYGFTEIEIAVPDSGIVELHADNL
VIESVTVDEEPAQFEVFPHYLHLDSGDRWCSVSSASSAADAAGSVYLSTLDRELVPNLLI
MCSKSSKPESEQQEEPLENGVKSSIEEKQEEPGTLENGVKSSAEEKQNVKKLCIDYWVEK
AETGIHFDGDVLHTDNQIRRARCWFPCMDDNLQRCCYDLEFTVASNLVAVSSGTLLYQVL
SKDDPSRKTYVYRLDVPVAAGWISLVVAPFEILPDRHIAQLSHICLPPNLSKLRNTIGFF
HNTFSHYEDYLAAPFPFGSYTQVFLSPEMAISSLSLGASMNIFSSQLLFDEKVIDQTIET
RIKLAYALARQWFGVYITSETPNDDWLLDGLAGFLTDTYIKRFLGNNEARYRRYKANCAV
CRADDSGATALSSSASSKDLYGTQCIGFYGKIRVWKSVAVLQMLEKQMGPEPFRKILQQI
VSKAQITTRTWRTLSTKEFRHLANKVGNLERPFLKEFFPRWVGSCGCPVLKMGFSYNKRK
NLIELAVIRGCTARLDASATTCNGNLDSENREGDVGWPGMMSIRLHELDGMYDHPILPMT
GEPWQLLEIQCHSRLAAKRFQKPKKGSKPDGSDENEAVTTVDVRSTSDSPLLWLRADPEM
EYLAEIHFSQPVQMWINQLERDKDVIAQVQAIAILEALPHLSFSIVNALNNILKDSKVFW
KVRIEAAFALANTASEETDWAGLLHLITFYKSRRFDSNIGLPKPNDFHDFQEYFVLEAIP
HAIATVRATDKKSPREAVEFVLQLLKYNDNSGNFYSDVYWLAALIQSIGELEFGQQSIVY
LSSLLKRLDRLLQFDRLMPSHNGILTISCIRSLTQIALKLSEFVPLDRVIELIEPFRTSK
AIWQVRVEASRSLLDLEFQCKGIDAALSLFIKYLSEESSLRGQVKLGVHAMRLCQIRNES
GYDHELNSDTLVALLRLLESPISFNNVFLRHYLFCILQVLAGRVPTLHGVPRDESMGHAK
TCNELKNIFAALVKQSKPSEPPMDKFEVTHNGPFVFEVPGEADRSTLGPEPGKDITLIPD
TPKEADGLSHEIIVDSAKPPQSTVVGEVQEVDTIPISNDCMHSMADLPLPQDDIIVADIP
HSSVSEVPKELDSVTDGCVPLRDIPQDYPPPPPPPPPPAEKPILPETHEQRKPVVSLLHE
DLHVACSREASVPESHKRGRVVANSLRDGSLNAEASREHETISAGHERKKPVFRIKVKKS
TTSSCAGDPENPTVDKSHDGLHDIDRGASSSVSVSVDAPQRNFFEGASGNNHNNIDDVNS
CHDVGSRVTASIGSVKVAPDGEELMKELQCTAESSKVPPDDQTIRDRDVDMEGHKFASLQ
SLSCTKPDVNCTSLDTSNLHAHGSKGKHKKRNRDEKREKEHKSSKHDDPEYLERKRLKKE
KKRKEKEMAKLLDDGAKPKSKPKPSPSVELSQKKRENVEGKVRSHKGGDAINSITDLGRR
KDESEFRVGGAVKQSPSSLYTKNSDPGRKEAALQLRMGESSGAKLVSDRAAAAADNTPAS
APQASAAAPASTSHKLKIKIKNRTLGKS
NT seq
4767 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcctcgaaagggaaagagcgaagagcaaaagggagagaacacggaagctgta
attcgccatcagaagctctgcctttcaatcgacatggaaaagcgtcgaatttacggtttc
accgagattgaaatagctgtgccggacagcgggattgtggaattgcacgcagataatttg
gtaattgaatctgtgacagtcgatgaggagcctgcgcaatttgaagtgtttccacattat
ttgcatttggatagtggggatagatggtgctctgtgtcatccgccagttctgctgctgat
gcagccgggtcggtttacttatctactcttgatagggagttggttccgaatttgctgatc
atgtgtagtaaatcttctaagccggagagcgaacagcaagaagagcctctggagaatggg
gttaaatcttcaattgaagaaaaacaagaagaaccagggactctggagaatggagttaaa
tcttcagctgaagaaaagcagaatgttaaaaagctgtgcattgactattgggtggagaag
gcagaaacaggaatccactttgatggtgatgttttacacactgataaccaaataaggcgt
gcacgctgttggtttccttgcatggatgacaatttgcagcgctgctgctatgatttggag
ttcacagtagcgagtaatcttgttgcagttagctctgggactttgctttatcaggtcttg
agcaaagatgatccttcgcgtaaaacatatgtctatagattagacgttcctgttgcggct
ggatggatatccttggttgttgcaccatttgaaattcttcctgaccgtcatattgctcaa
ctgtcccatatttgtttgccacctaacttgtcaaaactgcggaacactataggatttttt
cataatactttcagccattatgaggattacctagctgcaccatttccttttggatcgtat
acacaagtctttttatctcctgagatggcaatatcttcattgagtttgggagcttcaatg
aacatcttcagctctcagttgctctttgatgagaaagtcattgatcagaccatagagaca
aggattaaacttgcttatgctcttgcaagacaatggtttggagtgtatatcacctctgaa
acaccaaatgatgattggttgttggatggccttgctggatttttaaccgatacatatatt
aagagattcctgggaaataatgaagcacgatatcggcggtacaaggctaactgtgctgtc
tgccgagcagatgatagtggtgctactgccttaagctcctctgcttcttccaaggatcta
tatgggacccaatgcattggtttttatggaaaaattagagtctggaagtctgtggcagtt
cttcagatgttggaaaagcagatgggtcccgagccctttcgtaagattctgcaacaaatt
gtttcaaaagctcaaattacaacacggacttggaggacccttagtactaaagagtttagg
caccttgcaaataaagttggaaatcttgagcgtccttttcttaaagagttttttcctcga
tgggttggatcttgtggttgtccagtactaaagatgggcttctcctacaacaagagaaag
aacttgattgaattagcagtaataaggggatgcacagccagactagatgcaagtgcaacc
acatgcaatggtaaccttgactctgaaaatcgtgaaggtgatgttggatggcctggcatg
atgagcatacgccttcatgagcttgatggcatgtatgaccatccaattcttcccatgact
ggagaaccttggcagcttcttgaaatacaatgtcattccaggcttgctgctaaacgcttt
caaaaaccgaaaaagggttcaaaacctgatggttctgatgaaaatgaagctgtgacaact
gtagacgtgcgctcaacttctgattcacccttgttgtggctccgggcagatccagaaatg
gagtatctagctgaaattcattttagtcaaccagttcagatgtggataaatcagctggaa
agggacaaagatgttattgcacaggtgcaagcaatcgcaatacttgaagcattgccacat
ctttcattttccattgttaatgccctcaacaatatcctcaaggactctaaggtgttttgg
aaagtccgaattgaggcagcatttgccttagccaacactgcatctgaggaaactgattgg
gctggcttgctccatttgatcactttctataaaagtcgaagatttgattctaatatagga
ctacccaagccaaatgactttcacgattttcaggagtattttgtacttgaggctattccg
catgcaattgcaactgtgcgagcaacagacaagaaaagccctagagaagctgttgaattt
gttttacaacttttaaagtataatgataacagtggaaacttctattctgatgtttactgg
ctggctgcactcatccagtccattggtgaacttgaatttggacaacagagcatagtctat
ttatcatcccttctcaagcgacttgatcgacttttacagttcgataggttaatgccaagc
cacaatgggatcctgactatcagttgtatccgatcgttgacccaaattgctctgaaattg
tcagaatttgtacctcttgatcgtgtgattgagctaattgaaccttttcgaacttccaag
gcaatatggcaagttcgagttgaagcaagcaggtctctcctggatcttgagtttcaatgc
aaaggcattgatgctgcattgtcattattcattaaatacttgagtgaagaatcatcttta
agaggtcaggtaaagcttggtgtgcatgcaatgaggttatgtcagataagaaatgaatct
ggctatgaccatgaattgaatagtgacacccttgttgctttgcttcgccttcttgagagc
cctatctcattcaataatgtgtttctccgtcattacctattctgcattttacaagtcctt
gctggaagggttccaacacttcatggagtgccaagagatgagagtatggggcatgccaag
acttgcaatgaactgaagaatatttttgctgctcttgtcaagcaatctaagccatcagag
cctcctatggacaagtttgaggttacacataatggtccatttgtttttgaagttcctggg
gaagcagatcgttccacacttggtcctgaacctggaaaagatattactctgattccagat
actccgaaagaagcagatggtctgagccatgaaataatagtagatagtgccaaacctcct
cagagcacagttgttggagaagttcaggaagtagacactattcccatcagtaatgattgc
atgcactcaatggctgaccttccacttccacaagatgatatcattgtggcagatatacct
catagttcagtttctgaagtcccaaaagagttggattctgttactgatggttgtgtacca
ctgcgtgacattccacaggattatcctcctcctccaccaccaccaccaccaccagcagaa
aaacccattcttcctgaaacccatgaacaacgaaagcctgttgtgagcctcttgcatgag
gatttacatgttgcgtgctctagggaagcaagcgttcctgaaagtcacaaacgtggtagg
gtagttgctaacagcttacgagatggctcactaaatgccgaagcttctagagaacatgaa
accatttctgccggtcatgaaagaaaaaaacctgtttttaggattaaagttaaaaagtct
accacatctagctgtgctggtgatcctgagaatcccactgtggataaatctcatgatggt
cttcatgacattgatcgtggggcaagcagttccgtatctgtatctgtcgatgcaccacaa
agaaactttttcgagggtgcaagtggtaataaccataacaacattgatgatgtaaattcc
tgtcatgatgttggatctagagtaactgccagcattggcagtgtcaaagtcgcccctgac
ggtgaagaactaatgaaggaactacagtgtactgctgaatcaagcaaagtgcctcctgat
gatcaaaccatcagagatagagatgtggatatggagggacataaatttgcaagtttacag
tctctctcttgcactaagcctgacgttaattgcacttcacttgatacaagtaaccttcac
gctcatggtagtaaaggcaagcacaagaagagaaacagggatgagaaaagagaaaaagaa
cacaaaagtagtaagcatgatgatccggagtacttggagcggaaaaggttaaagaaggag
aagaagcggaaagagaaggagatggcaaagctgttggatgatggggcaaagcctaagtct
aagcctaagccttcgccttcagtggaactatcacaaaagaagagagaaaacgttgaaggt
aaagtgcgttcgcataaaggcggtgacgccattaatagtattacagatttagggcgtaga
aaagatgaatcggagtttagagttggcggggctgtaaagcagtcaccatcaagcttgtac
acgaagaacagcgatcccggaaggaaagaggcggccttacaactaagaatgggcgagtca
agcggagcaaagttggtaagcgatagagcagcagcagcagcagataatacgcctgcaagt
gcaccccaagctagtgcggcagccccggcaagcacttcacataaacttaagattaaaatt
aaaaatcgaacacttggaaaatcctga
DBGET
integrated database retrieval system
