Ipomoea triloba (trilobed morning glory): 116021620
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Entry
116021620 CDS
T07384
Name
(RefSeq) transcription initiation factor TFIID subunit 6-like
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116021620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
itr03021
]
116021620
03036 Chromosome and associated proteins [BR:
itr03036
]
116021620
Transcription machinery [BR:
itr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
116021620
Coactivators
SAGA/TFTC/STAGA complex
116021620
Chromosome and associated proteins [BR:
itr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
116021620
STAGA complex
116021620
TFTC complex
116021620
SAGA complex
116021620
SLIK complex
116021620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
TFIID-31kDa
Histone
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
116021620
NCBI-ProteinID:
XP_031117931
LinkDB
All DBs
Position
6:complement(18941695..18946499)
Genome browser
AA seq
535 aa
AA seq
DB search
MSIVPKETIEVIAQSIGISNLSPEVSPELAADVEYRLREIMQESIKCTRHSKRTILTAED
VDAALSIRNVEPIYGFASGDPMRFKRAVGHKDLFYIEEKDLDFKDVIEAPLPKAPLDTAL
VSHWLAVEGVQPSVPENPPHEALAAPQDNRMMEYKEDGGSVDLKLPVKHVLSRELQLYYE
KITDLAVNRSNSVLLKEALVSLATDSGLHPLVPYFTFFIADEVSRNLNNFPLLYALMRLV
WSLLQNPHIHIEPYLHQLMPSVMTCLVAKRLGNKLSDNHWELRDFTAKLVALVCKRFGHV
YHNLQSRVTRTLLHAFLDPTKALPQHYGAVQGLAALGPSVVRLLLLPNLEPYMQLLEPEM
QLEKQKNEMKRHEAWRVYGALACATGLCIYDRLKTLHTLLPSPARAVLKSRMKVASISNK
SKMSMDNTVQQPPLKKLVTDGPAGAVPAKSLPGGTQGATGGYAASFPSTLSSENLPRMGG
SRRDMVGGQASKAAAALDRASKGDVDVAHLIPMLYEHFGESVISFSLAPELSIFL
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgagcatagtgccgaaagagacaatagaagtgatagcgcagagcatcggaatcagcaat
ttgtccccggaagtgtcgccggaacttgcagccgatgtcgagtaccgtctccgagaaata
atgcaggaatccataaaatgcacgagacattcgaagaggacaatcttaactgccgaggat
gtggatgcagcgctcagcatacgaaatgttgagccaatatatggatttgcatctggagat
cctatgcggttcaaaagagctgtggggcataaggatttgttctacattgaagaaaaggat
ttagacttcaaggatgtgattgaagctcctctaccaaaagctccattagatactgcatta
gtatctcattggttagctgttgaaggagtgcagccttctgttcctgaaaatcctcctcat
gaagcactagcagcaccacaggataatagaatgatggagtataaagaagatggaggttca
gttgacctcaagttacctgtaaagcatgtactatcccgtgaacttcagttatactatgaa
aaaattacggatttggcagtgaatagatctaactctgtactcttgaaagaagcacttgtg
agtttggcaacagattctgggcttcatcctttggttccttacttcacattttttattgct
gatgaggtctcaaggaacttgaataacttccctcttttgtatgctttgatgcgtcttgtt
tggagccttcttcagaatcctcacattcatattgaaccttatttgcaccaattgatgccc
tctgtaatgacttgccttgttgcaaaaagattgggcaataaactctcagacaatcactgg
gaacttagagacttcacagccaagttggtcgctttggtatgcaaaaggtttggtcatgtg
tatcacaatctccagtcgcgtgtcacaaggactttgctgcatgcgtttctggatccaaca
aaggcgctgcctcagcattatggcgcagtacaagggctagctgcccttggccctagtgtg
gttcggctgcttttgctgcccaaccttgagccttatatgcaactcttggagccagaaatg
caactagaaaaacaaaagaatgagatgaagaggcatgaagcatggcgagtgtatggtgcc
ctggcgtgtgcaactggtttatgtatttatgatcggcttaagactctgcacactttactg
ccctcaccagcgcgtgctgttctgaagagtaggatgaaagtcgcttcaatatcaaataaa
agtaaaatgagcatggacaacacagtgcagcagcccccactgaagaagttggtgactgac
gggccagctggtgcagtgcctgcaaagtcgttgcctggaggaacacaaggcgctactggg
ggatatgctgccagtttcccatctactttgtcgagtgagaatttgccacgaatggggggt
agtagacgggatatggttggtggtcaagcctcaaaagcggcagctgcccttgatcgggcc
tcgaaaggggatgtggatgttgcacatttgatacctatgctgtatgagcattttggtgaa
agtgtcatatccttcagccttgcacctgagttgtcaatcttcctatga
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integrated database retrieval system
