Ipomoea triloba (trilobed morning glory): 116021642
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Entry
116021642 CDS
T07384
Name
(RefSeq) DNA-directed RNA polymerases I and III subunit rpac1
KO
K03027
DNA-directed RNA polymerases I and III subunit RPAC1
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
116021642
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
itr03021
]
116021642
Transcription machinery [BR:
itr03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
116021642
RNA polymerase I system
RNA polymerase I
116021642
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Fer4_7
Fer4_9
Motif
Other DBs
NCBI-GeneID:
116021642
NCBI-ProteinID:
XP_031117955
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All DBs
Position
6:complement(18681779..18686753)
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AA seq
389 aa
AA seq
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MSSTSTDSESETEPMTVEKVPVWDLPDVPQGQLPSHIENLRTRVLCTYIAPTNTDKIKYS
GAFASMGVDNSLRSEQFRKNFRVEVMKLNEDDIEFDMIGIDAAVANAFRRILIAELPTMA
IEKVLIANNTSIIQDEVLAHRLGLIPLKVDPRLFEYMSENDVPNEKNTIVFSLHARCEKA
KKERISVKSSELKWLPNGSEFVLATENSASSSASKPKTYTSFSCSQDSLPEFSNNPIAPK
YPDITIARLGAGQEIELEAHAVKGIGKTHAKWSPVATAWYRMLPEVVLLREIEGDEAEQL
VEKCPVKVFDIEDIGKGKKRATVARPRACTLCRECIREEGWEKNVALQRVKDHFIFTIES
TGALPPEVLFTEAVKILEDKCERVITELS
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccacttctaccgattcggagtcggagaccgagccaatgacggttgagaaagtt
ccagtatgggatttgccggacgtgccacaggggcagctaccatctcatatcgagaacctg
cgaactcgtgttctctgcacttacatagctcccactaatacagacaaaatcaaatactct
ggcgcctttgcatcaatgggtgttgataacagcttgcgatcggaacagttcagaaaaaac
tttagagtcgaagttatgaagcttaatgaagatgacattgagtttgacatgattggaatt
gatgctgcagttgccaatgcattccgcagaatcctcattgcagagcttccaactatggca
attgagaaagttctaattgcaaacaacacatctatcatccaagatgaggttcttgcccat
agacttggtctcatcccacttaaagttgatcccagactgtttgaatatatgtcagaaaat
gatgtacccaatgaaaagaacacaattgttttcagtctacatgctcgctgtgagaaagct
aaaaaggagagaatttctgtgaagtcaagcgagctgaaatggttacctaacggcagcgag
tttgtgctggccacagaaaattcagcgtctagttcagcgtcaaagccaaaaacttatact
tcattcagctgtagtcaagattctctaccagaattttccaacaatcctattgcccccaag
taccccgacattacgatagctagacttggggctgggcaggagatagaactagaagcacat
gctgttaaagggattggtaagacacatgcaaagtggtcaccggtggccactgcttggtac
aggatgcttcctgaggttgtattattgagagaaattgaaggtgatgaagcagaacaactt
gtggaaaaatgccctgttaaagtatttgacattgaagatattggcaaaggtaaaaagagg
gcaactgtagcaagaccgagggcatgtaccctttgtagggagtgcattagggaagaaggc
tgggagaagaacgtggctctacaacgcgtaaaagatcatttcatctttactattgaatcg
actggagctttaccccccgaggttctgttcactgaagctgtaaagattttggaagataaa
tgtgagcgtgtgataacggagctctcttga
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