Ipomoea triloba (trilobed morning glory): 116021656
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Entry
116021656 CDS
T07384
Name
(RefSeq) RNA polymerase sigma factor sigC-like isoform X1
KO
K03093
RNA polymerase sigma-I factor
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
itr03021
]
116021656
Transcription machinery [BR:
itr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
116021656
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Motif
Other DBs
NCBI-GeneID:
116021656
NCBI-ProteinID:
XP_031117975
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Position
6:complement(11465468..11470793)
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AA seq
553 aa
AA seq
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MGFRLPLKWGLSVQPPFSTKSSSYWLSSISFKGRETLYNSLRTSPSFINGENDASHNDPL
KVWTCLSDAQHCENDDSVTAVKMAIGRGSQSGFYTRTCNNVDMSAQEDKLPFLESSKAKH
FGFLMQNLEMLEHIFADSDGVRLERDILVQLERIGALELFHTCLERTLKSSTSSNLTDVP
IELIEEIQEDGLVNVNVDKSVVSSGKRQERESRRKRQPKNTRGIKVELLPKRFGDPRQPK
LSSGKKLGNSRNTRQNIAKNEIEMSIGIKVVAELERLRSVLEEETGRVASSSGWAKAAGL
SQKILQQRLHFGWYCRDELLRSTRSLIIYLARNYRGFGVAFDDLIQAGNMGVLEGAVRFD
HTRGYKFSTYAQYWIRRSMSRTVAKHARGIRIPIKLRKSINEIQKARNALSSSHGKFLSE
SIIAEFTGLSTERIALANKRLRVVGSVDQKVGDCISVKFMEFTSDTSTMSPEEAVMREYM
VNKMYLLLKDLMPIERQILIFRFGLGNIPRKSLEEIGRLFGVSKEWIRRVESRALAKLRN
ENCLQDFSRYLHV
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggggtttaggctgcccctgaaatggggtctctcagttcagccccctttctccaccaag
tcatcatcgtattggctttcttcaatttcattcaagggaagggagactttatacaattca
ttaaggacttctccatcttttatcaatggggagaatgatgcttcgcataatgatcctctc
aaggtgtggacttgcttatctgatgcacaacactgtgaaaatgacgactctgtaactgca
gtgaagatggcaattggcagagggtctcaaagtggattctacaccagaacctgcaacaat
gttgatatgtcagcgcaggaggataagttgccattccttgaatcatccaaagcaaaacat
tttggttttctgatgcaaaatcttgagatgctggagcatatttttgctgactcagatggc
gttagactggaaagagatattcttgtgcaactagaaaggattggagctctagaattattc
catacctgtcttgagaggacactaaaatcttcgacttcctccaatttgactgatgtgcca
attgagcttattgaagaaattcaggaggatggtcttgtgaatgttaacgtggataagagt
gttgtctcctctggaaaaagacaagaaagggaatcaaggagaaagagacaacccaagaat
accagaggcattaaagtagaactattgccaaaaagatttggagatccaagacagccaaag
ttatcttctggaaaaaaattaggaaattctagaaatacacgtcagaatatcgctaaaaat
gaaatagaaatgtcaattggtattaaggtggttgccgaactggagaggttaaggtcagta
ctggaagaagaaactggccgggtagctagctcaagtggctgggctaaagctgctggtctg
agccaaaagatcttgcagcagcgtttacattttggttggtattgtagggatgagcttcta
agaagtacaaggtccttaatcatatatcttgccagaaactacaggggatttggtgtggca
tttgatgatctaatccaggcagggaatatgggtgtcctagaaggtgctgtaagatttgac
cacacaaggggatacaaattctcaacctatgcccagtattggataaggagatcaatgtcg
agaactgtagcaaagcatgctagagggattcgaattcctatcaaattacgtaaatcaata
aatgaaatacaaaaagctcgaaatgctttgagtagcagccatggaaaatttctgagtgaa
agtataattgcagagttcacaggtctttccacagaaagaattgcattggccaacaaacga
ctgagagttgtgggttcagttgatcagaaagttggagactgtatcagtgtcaaattcatg
gagtttacctcagatacatcaacaatgagtccagaagaagctgtgatgagagagtacatg
gtaaataaaatgtatttacttctcaaagatttgatgcctatagagcggcagatattgatc
ttcaggtttggtcttggaaatattccacgcaagtcgctcgaggagattgggaggcttttt
ggtgttagcaaagagtggattagaagagtagaaagtagagcactcgcaaaacttagaaat
gagaattgtcttcaggattttagccgttatctgcatgtatag
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