KEGG   Ipomoea triloba (trilobed morning glory): 116021903
Entry
116021903         CDS       T07384                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 4-like
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
itr  Ipomoea triloba (trilobed morning glory)
Pathway
itr03020  RNA polymerase
itr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:itr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    116021903
  09124 Replication and repair
   03420 Nucleotide excision repair
    116021903
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:itr03021]
    116021903
   03400 DNA repair and recombination proteins [BR:itr03400]
    116021903
Transcription machinery [BR:itr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     116021903
DNA repair and recombination proteins [BR:itr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      116021903
SSDB
Motif
Pfam: RNA_pol_Rpb4 TMEM247
Other DBs
NCBI-GeneID: 116021903
NCBI-ProteinID: XP_031118284
LinkDB
Position
6:complement(15225533..15228655)
AA seq 204 aa
MSEMGGKSSLKSPASSNGKDDSSVSNKGRKVQFDSDSLDGNLSKSNGKASGSVGKGGKGG
KGSSGKGQTSKAPLPLELRVEQEISENTKCLMDCEAAEILQGIHDQMTILSEDPAIKLPT
SFDKGLTYAMRHKLYENYETVKQVLKPLKEHGVADSEMCMIGNFHPESTDEVFALVPSLK
GKKNKLQEPLKNVLEELAKLKSSS
NT seq 615 nt   +upstreamnt  +downstreamnt
atgtcagaaatgggtggaaaatcttctctcaaatctcctgcatcctcgaatggaaaggat
gacagctccgtgtcaaataaagggaggaaggttcagtttgattctgattcactggatggt
aatttatcaaaatccaatgggaaagctagtggatcagttggcaaaggtggaaaaggaggc
aagggaagcagtggcaaaggtcaaacttcaaaagcacctcttcccttggagctcagagtt
gagcaagaaatttcagagaataccaagtgcctgatggattgtgaagctgctgaaatcttg
caaggcatccatgaccaaatgactatactgtctgaagatccagcaataaaacttcctacg
tcatttgacaagggattgacgtatgccatgaggcataaactttatgagaactatgagacg
gtcaaacaagttcttaagccattgaaggagcatggtgttgctgatagtgagatgtgcatg
attggcaactttcaccccgaatctactgacgaagtctttgcacttgtcccatctttgaag
ggcaagaaaaataagctacaagagcctctaaaaaatgtcttggaggaattggcaaagctt
aagagctcttcataa

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