Ipomoea triloba (trilobed morning glory): 116021940
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Entry
116021940 CDS
T07384
Name
(RefSeq) RNA-binding protein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116021940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
itr03019
]
116021940
Messenger RNA biogenesis [BR:
itr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
116021940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_Nup35
Nup35_RRM_2
DUF7788
ERO1
Motif
Other DBs
NCBI-GeneID:
116021940
NCBI-ProteinID:
XP_031118333
LinkDB
All DBs
Position
6:24588644..24590589
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AA seq
336 aa
AA seq
DB search
MQDSDRSKLFVGGVSRQTTDETLREHFSKYGTVVSAVIAKDGITGNPRGFAFVSFTEPSA
VDNALRDTHEILGRTVEVKKAIPRSEQEQREQHSRGLSRSSRTSGRSDNQFSTKKIFVGG
LSASLTEEEFKGYFERFGRIMDVVVMHDNVTHKPRGFGFITFSSEDAVEQVTQKNFHELC
GKLVEVKRAVPKDGSSSRSHNYNSSGRGGSFESYQHVIYPPVSPSYRVFPSYGPVTGYES
VAGYPYQAGFIGSDYPAGTYSGFVYGAAPFAPRAPWFGSAMVGLRGSSLPYGGPTIYPAC
LNGGVGVMGVTTTGFYGFTGTGINGKPAQPGSTGGI
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgcaggattcggacagaagcaagctgtttgtgggaggggtttcccggcagaccaccgac
gagaccctcagggaacacttctctaagtacggaaccgtggttagcgctgtgatcgccaag
gatggaattaccggcaaccctcgagggtttgccttcgtctccttcaccgaaccctccgcc
gtcgataatgccctccgagatacccatgaaatcctcggaagaacggtagaggtgaaaaaa
gcaatacctagaagtgaacaagaacaaagagaacaacatagtagggggttgagtaggagt
agtaggactagcggtaggagcgataaccagtttagcacaaaaaagatttttgtaggggga
ttatcagctagtctaactgaggaagagttcaagggctattttgaaaggtttggtaggatc
atggacgtagttgtgatgcacgacaacgtgacccataagccacggggatttgggtttatt
acttttagttcagaggacgctgttgaacaagttacgcagaagaatttccatgagttgtgt
ggtaagcttgtagaggttaagagggctgtaccaaaagacggtagcagcagtcgcagccac
aattataatagtagtggaaggggtggttcctttgaaagttaccagcacgtaatttatcca
cctgttagtcctagttacagagttttcccgagttatggaccagttacggggtatgaaagc
gttgcagggtatccatatcaagctggatttattggcagtgattaccctgctggaacatac
agtggatttgtttacggtgctgctccttttgcacctagggctccttggtttggctcagcg
atggttggtcttagaggaagttcattaccttatggcggtccaactatctatcctgcctgt
ttgaacggtggagttggagtgatgggcgtgactactactggattttatgggtttacggga
actggaataaatgggaaacccgctcaacctggaagcacagggggtatttga
DBGET
integrated database retrieval system
