Ipomoea triloba (trilobed morning glory): 116021981
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Entry
116021981 CDS
T07384
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr00040
Pentose and glucuronate interconversions
itr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
116021981
Enzymes [BR:
itr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
116021981
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
116021981
NCBI-ProteinID:
XP_031118377
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Position
6:21518692..21521741
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AA seq
470 aa
AA seq
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MFPTAIATCILLFCLILNSSSLPSQIENATFTLTGQHPNPEAVIQEVQRKVNESVWRRNL
FLLTEKDQCQTGNPIDDCWRCEPNWANNLQQLADCAIGFGRDAAGGKGGKIYVVSDSSDD
SAVEPKPGTLRHAVIQTEPLWIVFAADMTIDLRHELVVSSYKTIDGRGSAVRITGVGCII
LESVSHVIIHNLQIYNCAPSKTEELGLSPTQREKKSKSDGDGITVRMSNHIWIDHCALSK
CTDGLIDVTEGSTAVTISNSYFSHHDKVMLLGHTDSDAADDGMQVTVAFNRFGEGLEQRM
PRCRRGYFHVVNNDYTSWGLYAIGGSGNPTINCQGNRFTAPADPNLKEVTKRLEAEEKEW
EDWNWRSNGDVMENGAFFVPSGDGKDDIYAKASSTEPMSGVLIDQLIQNVGVLCGPGLTG
GVKQSGDGSSNWNGYLDGRMNFGGGASSPQSGTVTIFLSFFLLLVNSLIF
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtttccaacagccattgccacctgcattcttttgttctgcctgatcttgaactcctcc
tcacttccttcccagattgagaatgccaccttcacccttaccggccaacaccccaaccct
gaagctgtgattcaagaagttcaaaggaaagtaaacgaatcagtatggagaagaaacctt
ttcttgttaacagagaaggaccaatgccagacaggaaaccctattgacgactgctggcga
tgcgaaccgaactgggccaacaacctccagcagctagccgactgcgccattggcttcggc
cgagacgcggcgggcgggaaaggcggcaagatttacgtagtctccgactcgtcggacgac
agcgccgtcgagccaaagccgggaactctccgccacgcggtgatccaaacggagccgctc
tggatcgtcttcgcggcggacatgaccatcgacctccggcacgagctcgtcgtgagcagc
tacaagacgatcgacgggcgcggctccgccgtgcggatcaccggcgtaggctgcatcatt
ctcgagtccgttagccacgtcatcatccacaacctgcaaatctacaactgcgccccctcg
aagacagaggagctagggttaagcccgacgcagagagagaaaaaatccaaatcagacggc
gacggaataaccgttcgcatgtcgaaccacatatggatcgatcactgcgctttatccaag
tgtacggacggcctgatcgacgtcacggaggggtccaccgcggtcaccatatccaacagc
tatttctcccaccacgacaaagtcatgctgttgggacacaccgacagtgacgccgccgac
gacggaatgcaggtgaccgtagcgtttaaccggttcggagaaggcctagagcagaggatg
ccgaggtgtaggagagggtattttcacgtggtcaacaacgactacacgtcgtggggactg
tacgccatcggcgggagcggaaatccgaccatcaactgccagggtaaccgcttcacggcg
ccggcggatccaaacttgaaggaggtgacaaagcgactggaggcagaggagaaggaatgg
gaagattggaattggaggtcaaacggagatgtaatggaaaacggagcgttctttgtaccc
tccggtgacgggaaagatgatatttacgccaaagcctccagcacggagcccatgtccggc
gttctcattgatcagctaatacagaacgtcggcgtcctctgtggccccgggctcaccggc
ggcgtcaagcaaagcggcgacggaagtagtaactggaacggatacttggacggccgaatg
aactttgggggcggggcttcatcaccacaatcaggcactgtcactatatttttgtcattt
tttctacttcttgttaactctttgatcttttaa
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